Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM23P36406 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM23P36406 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM23P36406 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM23P36406 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM23P36406 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRIM23P36406 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 SAMMSON-213ENST00000641336 1521 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM23P36406 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM23P36406 CASC19-248ENST00000641674 1356 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 CIR1P2-201ENST00000514821 1342 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 AC092451.3-201ENST00000625067 1343 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM23P36406 RN7SKP160-201ENST00000363804 340 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 RNA5SP91-201ENST00000390902 119 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM23P36406 AL133173.1-201ENST00000423458 397 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM23P36406 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM23P36406 AC242426.1-201ENST00000435270 960 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 RPL5P16-201ENST00000471467 790 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM23P36406 DEFB109A-201ENST00000482450 265 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM23P36406 DUTP1-201ENST00000493631 470 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM23P36406 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM23P36406 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM23P36406 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM23P36406 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM23P36406 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM23P36406 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM23P36406 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM23P36406 AC015720.2-201ENST00000567709 334 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM23P36406 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM23P36406 AL513327.3-201ENST00000602618 469 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 AC022960.2-201ENST00000616300 666 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 AL035661.1-201ENST00000620459 1144 ntBASIC5.6□□□□□ -1.51
TRIM23P36406 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM23P36406 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM23P36406 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM23P36406 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM23P36406 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM23P36406 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM23P36406 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM23P36406 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM23P36406 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRIM23P36406 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM23P36406 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM23P36406 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM23P36406 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM23P36406 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM23P36406 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRIM23P36406 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM23P36406 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM23P36406 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM23P36406 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM23P36406 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM23P36406 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TRIM23P36406 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
TRIM23P36406 OR9K1P-202ENST00000641111 3217 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TRIM23P36406 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM23P36406 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
TRIM23P36406 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM23P36406 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM23P36406 RNA5SP296-201ENST00000410523 111 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM23P36406 AC012075.1-201ENST00000436549 580 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 AL390119.1-201ENST00000440329 312 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM23P36406 MEMO1P4-201ENST00000453590 386 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM23P36406 AP000547.1-201ENST00000454360 617 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 snoU13.29-201ENST00000459370 104 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 AC093719.1-201ENST00000480427 441 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 OR11I1P-201ENST00000486033 954 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM23P36406 DUTP7-201ENST00000507982 486 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 IGKV2-18-201ENST00000522607 343 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 AC007225.2-201ENST00000562529 256 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 RBM22P12-201ENST00000567098 1255 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 AC115989.2-201ENST00000578640 563 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM23P36406 RNU6-84P-201ENST00000607737 102 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 AL451049.1-201ENST00000608672 497 ntBASIC5.59□□□□□ -1.51
TRIM23P36406 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM23P36406 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM23P36406 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM23P36406 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
TRIM23P36406 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TRIM23P36406 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM23P36406 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM23P36406 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM23P36406 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.59□□□□□ -1.52
TRIM23P36406 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM23P36406 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.59□□□□□ -1.52
TRIM23P36406 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms