Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHRNA3P32297 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
CHRNA3P32297 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHRNA3P32297 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.9□□□□□ -1.47
CHRNA3P32297 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
CHRNA3P32297 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.9□□□□□ -1.47
CHRNA3P32297 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.9□□□□□ -1.47
CHRNA3P32297 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 AC104964.3-201ENST00000606115 2860 ntBASIC5.89□□□□□ -1.47
CHRNA3P32297 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CHRNA3P32297 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
CHRNA3P32297 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
CHRNA3P32297 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.89□□□□□ -1.47
CHRNA3P32297 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CHRNA3P32297 NPM1P37-201ENST00000403105 874 ntBASIC5.89□□□□□ -1.47
CHRNA3P32297 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.89□□□□□ -1.47
CHRNA3P32297 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.89□□□□□ -1.47
CHRNA3P32297 AC093155.2-201ENST00000420734 937 ntBASIC5.89□□□□□ -1.47
CHRNA3P32297 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.89□□□□□ -1.47
CHRNA3P32297 RPL34P3-201ENST00000421454 338 ntBASIC5.89□□□□□ -1.47
CHRNA3P32297 AC127526.2-201ENST00000426436 775 ntBASIC5.89□□□□□ -1.47
CHRNA3P32297 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.89□□□□□ -1.47
CHRNA3P32297 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 OR2AF1P-201ENST00000454899 889 ntBASIC5.89□□□□□ -1.47
CHRNA3P32297 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.89□□□□□ -1.47
CHRNA3P32297 RPS17P15-201ENST00000475609 349 ntBASIC5.89□□□□□ -1.47
CHRNA3P32297 DEFB109A-201ENST00000482450 265 ntBASIC5.89□□□□□ -1.47
CHRNA3P32297 AC139365.2-201ENST00000517972 253 ntBASIC5.89□□□□□ -1.47
CHRNA3P32297 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.89□□□□□ -1.47
CHRNA3P32297 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 RN7SL753P-201ENST00000581238 290 ntBASIC5.89□□□□□ -1.47
CHRNA3P32297 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.89□□□□□ -1.47
CHRNA3P32297 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.89□□□□□ -1.47
CHRNA3P32297 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CHRNA3P32297 RN7SL544P-201ENST00000617232 284 ntBASIC5.89□□□□□ -1.47
CHRNA3P32297 RN7SL763P-201ENST00000620922 284 ntBASIC5.89□□□□□ -1.47
CHRNA3P32297 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.89□□□□□ -1.47
CHRNA3P32297 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.89□□□□□ -1.47
CHRNA3P32297 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.89□□□□□ -1.47
CHRNA3P32297 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHRNA3P32297 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHRNA3P32297 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHRNA3P32297 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CHRNA3P32297 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CHRNA3P32297 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHRNA3P32297 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
CHRNA3P32297 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHRNA3P32297 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHRNA3P32297 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
CHRNA3P32297 MIR323A-201ENST00000362199 86 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 RNA5SP394-201ENST00000364216 119 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 HMGB1P20-201ENST00000402555 677 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 RN7SKP286-201ENST00000410894 299 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.88□□□□□ -1.47
CHRNA3P32297 AL357752.1-201ENST00000412817 349 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 CHEK2P5-201ENST00000423877 246 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.88□□□□□ -1.47
CHRNA3P32297 HMGB3P24-201ENST00000433260 622 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.88□□□□□ -1.47
CHRNA3P32297 NANOGP9-201ENST00000439890 892 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 YWHAEP1-201ENST00000453697 763 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 RN7SL188P-201ENST00000469842 285 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 RPSAP37-201ENST00000470913 821 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.88□□□□□ -1.47
CHRNA3P32297 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.88□□□□□ -1.47
CHRNA3P32297 AC106872.4-201ENST00000510050 523 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 RN7SKP253-201ENST00000516424 309 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 TMEM97P2-201ENST00000517841 403 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 AC027544.3-201ENST00000535082 757 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.88□□□□□ -1.47
CHRNA3P32297 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.88□□□□□ -1.47
CHRNA3P32297 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CHRNA3P32297 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.88□□□□□ -1.47
CHRNA3P32297 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.88□□□□□ -1.47
CHRNA3P32297 AC010547.6-201ENST00000571789 193 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 AC020978.7-201ENST00000575953 1187 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.88□□□□□ -1.47
CHRNA3P32297 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.88□□□□□ -1.47
CHRNA3P32297 AC022919.1-201ENST00000624979 626 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CHRNA3P32297 AC087565.3-203ENST00000641018 837 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHRNA3P32297 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHRNA3P32297 AC079097.1-201ENST00000512187 1399 ntBASIC5.88□□□□□ -1.47
CHRNA3P32297 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHRNA3P32297 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CHRNA3P32297 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CHRNA3P32297 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CHRNA3P32297 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms