Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU6-1017P-201ENST00000363613 106 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
HOXC12P31275 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.29□□□□□ -1.4
HOXC12P31275 AL034374.1-201ENST00000406329 351 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 RN7SKP146-201ENST00000410242 334 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 RN7SKP273-201ENST00000411392 314 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 AC066692.1-201ENST00000421721 457 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 OR6K4P-201ENST00000423179 955 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AL121916.1-201ENST00000429405 308 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HOXC12P31275 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 USP9YP22-201ENST00000438971 294 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 RPL31P44-201ENST00000447680 377 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.29□□□□□ -1.4
HOXC12P31275 RPL31P11-202ENST00000454082 372 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.29□□□□□ -1.4
HOXC12P31275 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC12P31275 RPL7P40-201ENST00000481703 745 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 NCOR1P1-202ENST00000486162 291 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 RN7SL306P-201ENST00000492941 296 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 MTND6P8-201ENST00000503471 522 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.29□□□□□ -1.4
HOXC12P31275 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 AC091965.2-201ENST00000512324 613 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AC109445.1-201ENST00000512356 383 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 RNA5SP518-201ENST00000515957 119 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AC120036.3-201ENST00000517826 292 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 ST13P6-201ENST00000522430 1102 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 AC092851.1-201ENST00000535964 478 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 HNRNPCP1-201ENST00000556181 766 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 ULK4P2-202ENST00000564187 492 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 AC010546.1-201ENST00000569391 485 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
HOXC12P31275 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 MIR4310-201ENST00000582950 57 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC12P31275 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC12P31275 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.29□□□□□ -1.4
HOXC12P31275 WBP1LP12-201ENST00000604449 331 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AC019257.2-201ENST00000605539 497 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 MIR6885-201ENST00000612241 66 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.29□□□□□ -1.4
HOXC12P31275 AC012629.3-201ENST00000623397 328 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AC130448.2-201ENST00000624082 374 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AL355480.1-201ENST00000629041 99 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 AC116618.1-201ENST00000634617 774 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
HOXC12P31275 OR7E91P-202ENST00000642062 1198 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC12P31275 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 CCT8P1-201ENST00000413611 1657 ntBASIC6.29□□□□□ -1.4
HOXC12P31275 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC12P31275 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HOXC12P31275 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC12P31275 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC12P31275 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC12P31275 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
HOXC12P31275 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
HOXC12P31275 SAMMSON-210ENST00000641260 1308 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.28□□□□□ -1.4
HOXC12P31275 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXC12P31275 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC12P31275 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXC12P31275 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC12P31275 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HOXC12P31275 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HOXC12P31275 SNORA26.8-201ENST00000391306 124 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms