Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.72□□□□□ -1.33
SMARCA1P28370 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.72□□□□□ -1.33
SMARCA1P28370 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.72□□□□□ -1.33
SMARCA1P28370 XKRY2-201ENST00000442362 1093 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.72□□□□□ -1.33
SMARCA1P28370 RSU1P1-201ENST00000453416 441 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 AC108729.2-201ENST00000476543 840 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMARCA1P28370 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMARCA1P28370 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.72□□□□□ -1.33
SMARCA1P28370 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMARCA1P28370 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.72□□□□□ -1.33
SMARCA1P28370 SNORD46.2-201ENST00000516021 102 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 AC022826.1-201ENST00000519383 805 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.72□□□□□ -1.33
SMARCA1P28370 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.72□□□□□ -1.33
SMARCA1P28370 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SMARCA1P28370 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SMARCA1P28370 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SMARCA1P28370 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.72□□□□□ -1.33
SMARCA1P28370 AC096996.1-201ENST00000563813 325 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
SMARCA1P28370 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMARCA1P28370 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.72□□□□□ -1.33
SMARCA1P28370 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.72□□□□□ -1.33
SMARCA1P28370 AC133794.1-201ENST00000602731 914 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SMARCA1P28370 RN7SL544P-201ENST00000617232 284 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.72□□□□□ -1.33
SMARCA1P28370 RN7SL763P-201ENST00000620922 284 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 AL138955.1-201ENST00000622881 1040 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 AC079298.2-201ENST00000623885 459 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.72□□□□□ -1.33
SMARCA1P28370 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.72□□□□□ -1.33
SMARCA1P28370 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SMARCA1P28370 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.72□□□□□ -1.33
SMARCA1P28370 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SMARCA1P28370 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
SMARCA1P28370 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SMARCA1P28370 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SMARCA1P28370 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
SMARCA1P28370 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SMARCA1P28370 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SMARCA1P28370 FBXL21-201ENST00000297158 1305 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SMARCA1P28370 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.72□□□□□ -1.33
SMARCA1P28370 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.71□□□□□ -1.33
SMARCA1P28370 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
SMARCA1P28370 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.71□□□□□ -1.33
SMARCA1P28370 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.71□□□□□ -1.33
SMARCA1P28370 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.71□□□□□ -1.33
SMARCA1P28370 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.71□□□□□ -1.33
SMARCA1P28370 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SMARCA1P28370 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.71□□□□□ -1.34
SMARCA1P28370 AC015689.2-201ENST00000528172 1738 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SMARCA1P28370 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.71□□□□□ -1.34
SMARCA1P28370 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SMARCA1P28370 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SMARCA1P28370 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.71□□□□□ -1.34
SMARCA1P28370 RN7SKP279-201ENST00000411383 298 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 VN1R37P-201ENST00000419096 748 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 RPS3P2-201ENST00000421346 701 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 MTND4P24-201ENST00000424002 397 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 UBE2D3P3-201ENST00000426992 425 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 MTND6P12-201ENST00000428247 522 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.71□□□□□ -1.34
SMARCA1P28370 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.71□□□□□ -1.34
SMARCA1P28370 GAPDHP48-201ENST00000436626 961 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.71□□□□□ -1.34
SMARCA1P28370 H3F3BP1-201ENST00000440551 403 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 AC073109.1-201ENST00000445066 978 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.71□□□□□ -1.34
SMARCA1P28370 REG1CP-206ENST00000447469 496 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 FRG2FP-204ENST00000453982 852 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 AC004129.2-201ENST00000457229 287 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.71□□□□□ -1.34
SMARCA1P28370 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.71□□□□□ -1.34
SMARCA1P28370 AC010468.3-201ENST00000508225 458 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 AC010460.2-201ENST00000509054 677 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.71□□□□□ -1.34
SMARCA1P28370 RNU6-889P-201ENST00000517189 103 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.71□□□□□ -1.34
SMARCA1P28370 AC021678.3-201ENST00000517893 476 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 AC139365.2-201ENST00000517972 253 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 IGKV2-4-201ENST00000523070 340 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.71□□□□□ -1.34
SMARCA1P28370 AC068339.2-201ENST00000534395 618 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.71□□□□□ -1.34
SMARCA1P28370 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.71□□□□□ -1.34
SMARCA1P28370 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
SMARCA1P28370 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.71□□□□□ -1.34
SMARCA1P28370 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.71□□□□□ -1.34
SMARCA1P28370 AC006116.7-201ENST00000590141 756 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 ZNF92P2-201ENST00000600543 1059 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 RNU6-84P-201ENST00000607737 102 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 AC097460.3-201ENST00000623099 442 ntBASIC6.71□□□□□ -1.34
SMARCA1P28370 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.71□□□□□ -1.34
SMARCA1P28370 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SMARCA1P28370 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms