Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 MIR6862-2-201ENST00000614755 70 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 AC007786.3-201ENST00000615154 596 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 AC021766.1-201ENST00000624404 741 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.46□□□□□ -1.7
CCL3L1P16619 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.46□□□□□ -1.7
CCL3L1P16619 AC006600.2-201ENST00000624834 2506 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCL3L1P16619 AC100757.1-201ENST00000616872 1835 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.46□□□□□ -1.7
CCL3L1P16619 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.46□□□□□ -1.7
CCL3L1P16619 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCL3L1P16619 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCL3L1P16619 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCL3L1P16619 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.46□□□□□ -1.7
CCL3L1P16619 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCL3L1P16619 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CCL3L1P16619 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCL3L1P16619 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCL3L1P16619 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.45□□□□□ -1.7
CCL3L1P16619 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.45□□□□□ -1.7
CCL3L1P16619 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCL3L1P16619 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCL3L1P16619 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCL3L1P16619 RNA5SP335-201ENST00000363817 110 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCL3L1P16619 OR4K12P-201ENST00000406538 961 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 RPL35AP24-201ENST00000413846 330 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 AL158827.1-201ENST00000416300 391 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 AC079355.1-201ENST00000421770 223 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.45□□□□□ -1.7
CCL3L1P16619 BX276092.6-201ENST00000430476 250 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.45□□□□□ -1.7
CCL3L1P16619 MED28P3-201ENST00000444288 531 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.45□□□□□ -1.7
CCL3L1P16619 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.45□□□□□ -1.7
CCL3L1P16619 BX276092.8-201ENST00000455722 250 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 RPL7P45-201ENST00000455851 743 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 SIAH1P1-201ENST00000479411 923 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 AC108693.1-201ENST00000496068 432 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 RPEP1-201ENST00000504507 658 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCL3L1P16619 HMGB1P44-201ENST00000508597 572 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.45□□□□□ -1.7
CCL3L1P16619 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.45□□□□□ -1.7
CCL3L1P16619 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.45□□□□□ -1.7
CCL3L1P16619 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.45□□□□□ -1.7
CCL3L1P16619 AP003080.1-202ENST00000526526 915 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.45□□□□□ -1.7
CCL3L1P16619 OR4A43P-201ENST00000532938 908 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.45□□□□□ -1.7
CCL3L1P16619 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCL3L1P16619 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.45□□□□□ -1.7
CCL3L1P16619 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.45□□□□□ -1.7
CCL3L1P16619 AC108738.1-201ENST00000603703 237 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 AL359513.1-201ENST00000614364 557 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.45□□□□□ -1.7
CCL3L1P16619 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.45□□□□□ -1.7
CCL3L1P16619 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.45□□□□□ -1.7
CCL3L1P16619 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCL3L1P16619 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCL3L1P16619 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CCL3L1P16619 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CCL3L1P16619 AC137056.2-201ENST00000624055 1958 ntBASIC4.45□□□□□ -1.7
CCL3L1P16619 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCL3L1P16619 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CCL3L1P16619 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCL3L1P16619 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.45□□□□□ -1.7
CCL3L1P16619 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.45□□□□□ -1.7
CCL3L1P16619 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCL3L1P16619 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCL3L1P16619 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.44□□□□□ -1.7
CCL3L1P16619 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.44□□□□□ -1.7
CCL3L1P16619 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCL3L1P16619 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCL3L1P16619 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCL3L1P16619 AL022311.1-201ENST00000623726 19416 ntBASIC4.44□□□□□ -1.7
CCL3L1P16619 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCL3L1P16619 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCL3L1P16619 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCL3L1P16619 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCL3L1P16619 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.44□□□□□ -1.7
CCL3L1P16619 MIR143-201ENST00000385300 106 ntBASIC4.44□□□□□ -1.7
CCL3L1P16619 RNU11-201ENST00000387069 134 ntBASIC4.44□□□□□ -1.7
CCL3L1P16619 AC009804.1-201ENST00000400949 179 ntBASIC4.44□□□□□ -1.7
CCL3L1P16619 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CCL3L1P16619 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.44□□□□□ -1.7
CCL3L1P16619 NPM1P36-201ENST00000415681 835 ntBASIC4.44□□□□□ -1.7
CCL3L1P16619 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.44□□□□□ -1.7
CCL3L1P16619 DSTNP5-201ENST00000427921 523 ntBASIC4.44□□□□□ -1.7
CCL3L1P16619 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.44□□□□□ -1.7
CCL3L1P16619 RPL12P17-201ENST00000432393 498 ntBASIC4.44□□□□□ -1.7
CCL3L1P16619 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCL3L1P16619 AL133445.1-201ENST00000467051 452 ntBASIC4.44□□□□□ -1.7
CCL3L1P16619 IGBP1P4-201ENST00000503202 879 ntBASIC4.44□□□□□ -1.7
CCL3L1P16619 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.44□□□□□ -1.7
CCL3L1P16619 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.44□□□□□ -1.7
CCL3L1P16619 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.44□□□□□ -1.7
CCL3L1P16619 HMGN1P9-201ENST00000515212 298 ntBASIC4.44□□□□□ -1.7
CCL3L1P16619 SCARNA20.4-201ENST00000516969 131 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms