Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 NPM1P19-201ENST00000450070 712 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 AL672138.1-201ENST00000450604 1015 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 RN7SL30P-201ENST00000488416 306 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC4P09017 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC4P09017 IGLV2-28-201ENST00000520681 304 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC4P09017 OR5AM1P-201ENST00000532136 1032 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.43□□□□□ -1.54
HOXC4P09017 AC093388.1-201ENST00000609166 430 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 AC008115.4-201ENST00000619780 775 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC4P09017 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HOXC4P09017 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC4P09017 AC099654.3-201ENST00000447087 1546 ntBASIC5.43□□□□□ -1.54
HOXC4P09017 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC4P09017 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC4P09017 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC4P09017 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC4P09017 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC4P09017 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC4P09017 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HOXC4P09017 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC4P09017 PABPC1P6-201ENST00000445594 1829 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC4P09017 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HOXC4P09017 OR9K1P-201ENST00000326513 941 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC4P09017 AL133325.1-201ENST00000421090 382 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 SRSF1P1-201ENST00000424058 520 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC4P09017 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC4P09017 AL627308.1-201ENST00000435693 821 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC4P09017 AZGP1P2-201ENST00000454506 345 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 RN7SL188P-201ENST00000469842 285 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC4P09017 NPM1P28-201ENST00000492269 840 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 AC090058.1-201ENST00000498788 435 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 ST13P12-201ENST00000508958 1094 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC4P09017 MIR1269B-201ENST00000580405 75 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
HOXC4P09017 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC4P09017 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC4P09017 AC002069.2-201ENST00000603580 883 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC4P09017 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC4P09017 AC136428.4-201ENST00000634254 1155 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC4P09017 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
HOXC4P09017 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC4P09017 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HOXC4P09017 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC4P09017 AC006600.2-201ENST00000624834 2506 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 AL590763.1-201ENST00000398297 1545 ntBASIC5.42□□□□□ -1.54
HOXC4P09017 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC4P09017 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC4P09017 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HOXC4P09017 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC4P09017 AP005435.3-201ENST00000531260 3198 ntBASIC5.41□□□□□ -1.54
HOXC4P09017 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC4P09017 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
HOXC4P09017 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC4P09017 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC4P09017 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC4P09017 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HOXC4P09017 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
HOXC4P09017 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC4P09017 AC005294.1-201ENST00000355509 281 ntBASIC5.41□□□□□ -1.54
HOXC4P09017 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC4P09017 RNA5SP339-201ENST00000390987 122 ntBASIC5.41□□□□□ -1.54
HOXC4P09017 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.41□□□□□ -1.54
HOXC4P09017 DSTNP5-201ENST00000427921 523 ntBASIC5.41□□□□□ -1.54
HOXC4P09017 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXC4P09017 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC4P09017 snoU13.29-201ENST00000459370 104 ntBASIC5.41□□□□□ -1.54
HOXC4P09017 PGAM1P13-201ENST00000507497 754 ntBASIC5.41□□□□□ -1.54
HOXC4P09017 MTND6P2-201ENST00000512226 524 ntBASIC5.41□□□□□ -1.54
HOXC4P09017 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.41□□□□□ -1.54
HOXC4P09017 SCARNA16.4-201ENST00000516956 187 ntBASIC5.41□□□□□ -1.54
HOXC4P09017 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC4P09017 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC4P09017 AC084824.2-201ENST00000548906 345 ntBASIC5.41□□□□□ -1.54
HOXC4P09017 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC4P09017 NPM1P45-201ENST00000583151 559 ntBASIC5.41□□□□□ -1.54
HOXC4P09017 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC4P09017 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC4P09017 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC4P09017 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC4P09017 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HOXC4P09017 KYNUP3-201ENST00000574386 1341 ntBASIC5.41□□□□□ -1.54
HOXC4P09017 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC4P09017 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
HOXC4P09017 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC4P09017 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC4P09017 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC4P09017 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC4P09017 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC4P09017 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms