Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CD74P04233 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.67□□□□□ -1.66
CD74P04233 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD74P04233 PSG10P-201ENST00000501199 1500 ntBASIC4.67□□□□□ -1.66
CD74P04233 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CD74P04233 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD74P04233 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.66□□□□□ -1.66
CD74P04233 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.66□□□□□ -1.66
CD74P04233 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
CD74P04233 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.66□□□□□ -1.66
CD74P04233 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.66□□□□□ -1.66
CD74P04233 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.66□□□□□ -1.66
CD74P04233 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.66□□□□□ -1.66
CD74P04233 AL731532.2-201ENST00000623542 1953 ntBASIC4.66□□□□□ -1.66
CD74P04233 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CD74P04233 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.66□□□□□ -1.66
CD74P04233 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CD74P04233 AL359885.1-201ENST00000415786 903 ntBASIC4.66□□□□□ -1.66
CD74P04233 NENFP1-201ENST00000419476 466 ntBASIC4.66□□□□□ -1.66
CD74P04233 AC007161.1-204ENST00000423039 460 ntBASIC4.66□□□□□ -1.66
CD74P04233 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CD74P04233 AL353662.1-201ENST00000439099 327 ntBASIC4.66□□□□□ -1.66
CD74P04233 TIMM8BP2-201ENST00000445940 251 ntBASIC4.66□□□□□ -1.66
CD74P04233 AL157385.1-201ENST00000446973 268 ntBASIC4.66□□□□□ -1.66
CD74P04233 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.66□□□□□ -1.66
CD74P04233 RPL5P22-201ENST00000480199 884 ntBASIC4.66□□□□□ -1.66
CD74P04233 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.66□□□□□ -1.66
CD74P04233 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.66□□□□□ -1.66
CD74P04233 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.66□□□□□ -1.66
CD74P04233 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.66□□□□□ -1.66
CD74P04233 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.66□□□□□ -1.66
CD74P04233 OR4A41P-201ENST00000533053 928 ntBASIC4.66□□□□□ -1.66
CD74P04233 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.66□□□□□ -1.66
CD74P04233 AC007346.1-201ENST00000569208 867 ntBASIC4.66□□□□□ -1.66
CD74P04233 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.66□□□□□ -1.66
CD74P04233 MIR4271-201ENST00000582451 67 ntBASIC4.66□□□□□ -1.66
CD74P04233 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.66□□□□□ -1.66
CD74P04233 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.66□□□□□ -1.66
CD74P04233 AC011891.2-201ENST00000604949 397 ntBASIC4.66□□□□□ -1.66
CD74P04233 AC092681.3-201ENST00000609463 678 ntBASIC4.66□□□□□ -1.66
CD74P04233 FAM27E2-201ENST00000619668 403 ntBASIC4.66□□□□□ -1.66
CD74P04233 AL591926.1-201ENST00000620542 217 ntBASIC4.66□□□□□ -1.66
CD74P04233 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.66□□□□□ -1.66
CD74P04233 AC010325.3-201ENST00000641084 394 ntBASIC4.66□□□□□ -1.66
CD74P04233 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.66□□□□□ -1.66
CD74P04233 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD74P04233 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CD74P04233 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CD74P04233 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CD74P04233 AC003973.3-201ENST00000624863 2822 ntBASIC4.66□□□□□ -1.66
CD74P04233 QRSL1P1-201ENST00000400977 1540 ntBASIC4.66□□□□□ -1.66
CD74P04233 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD74P04233 AC114947.2-201ENST00000565748 2125 ntBASIC4.66□□□□□ -1.66
CD74P04233 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CD74P04233 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.65□□□□□ -1.66
CD74P04233 CASC19-238ENST00000641523 1558 ntBASIC4.65□□□□□ -1.66
CD74P04233 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CD74P04233 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.65□□□□□ -1.66
CD74P04233 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.65□□□□□ -1.66
CD74P04233 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CD74P04233 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CD74P04233 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CD74P04233 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.65□□□□□ -1.66
CD74P04233 AC007996.1-201ENST00000620414 2821 ntBASIC4.65□□□□□ -1.66
CD74P04233 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.65□□□□□ -1.66
CD74P04233 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CD74P04233 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CD74P04233 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CD74P04233 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD74P04233 AL159987.1-201ENST00000347911 293 ntBASIC4.65□□□□□ -1.67
CD74P04233 RN7SKP171-201ENST00000364417 303 ntBASIC4.65□□□□□ -1.67
CD74P04233 RNA5SP30-201ENST00000365552 115 ntBASIC4.65□□□□□ -1.67
CD74P04233 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CD74P04233 AL009179.1-201ENST00000406085 265 ntBASIC4.65□□□□□ -1.67
CD74P04233 RNA5SP296-201ENST00000410523 111 ntBASIC4.65□□□□□ -1.67
CD74P04233 SNORA79B-201ENST00000410557 148 ntBASIC4.65□□□□□ -1.67
CD74P04233 RPSAP35-201ENST00000413753 818 ntBASIC4.65□□□□□ -1.67
CD74P04233 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.65□□□□□ -1.67
CD74P04233 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD74P04233 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CD74P04233 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.65□□□□□ -1.67
CD74P04233 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CD74P04233 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CD74P04233 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.65□□□□□ -1.67
CD74P04233 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.65□□□□□ -1.67
CD74P04233 AC104849.1-201ENST00000462623 405 ntBASIC4.65□□□□□ -1.67
CD74P04233 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.65□□□□□ -1.67
CD74P04233 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
CD74P04233 RPS12P31-201ENST00000491419 398 ntBASIC4.65□□□□□ -1.67
CD74P04233 RPS24P16-201ENST00000497294 392 ntBASIC4.65□□□□□ -1.67
CD74P04233 AC113367.2-201ENST00000505749 160 ntBASIC4.65□□□□□ -1.67
CD74P04233 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.65□□□□□ -1.67
CD74P04233 HMGN1P16-201ENST00000508308 283 ntBASIC4.65□□□□□ -1.67
CD74P04233 GUSBP9-201ENST00000510138 584 ntBASIC4.65□□□□□ -1.67
CD74P04233 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.65□□□□□ -1.67
CD74P04233 RNA5SP473-201ENST00000516402 125 ntBASIC4.65□□□□□ -1.67
CD74P04233 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.65□□□□□ -1.67
CD74P04233 AC100784.1-201ENST00000522790 310 ntBASIC4.65□□□□□ -1.67
CD74P04233 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.65□□□□□ -1.67
CD74P04233 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms