Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
PDGFAP04085 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.99□□□□□ -1.29
PDGFAP04085 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PDGFAP04085 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.99□□□□□ -1.29
PDGFAP04085 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 MIR320B1-201ENST00000390209 79 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 RN7SKP161-201ENST00000411110 305 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 LINC00993-201ENST00000420453 540 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 CYP4F34P-201ENST00000425951 481 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.99□□□□□ -1.29
PDGFAP04085 USP12PX-201ENST00000432383 1057 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 CYCSP11-201ENST00000436426 315 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 RPS10P14-201ENST00000440748 502 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.99□□□□□ -1.29
PDGFAP04085 MGAT2P1-201ENST00000449718 797 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 AC005517.1-201ENST00000452091 489 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.99□□□□□ -1.29
PDGFAP04085 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.99□□□□□ -1.29
PDGFAP04085 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.99□□□□□ -1.29
PDGFAP04085 RNY4P37-201ENST00000516225 96 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.99□□□□□ -1.29
PDGFAP04085 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.99□□□□□ -1.29
PDGFAP04085 HMGB1P23-201ENST00000518743 568 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 AC130366.1-201ENST00000526505 1192 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 OR5M4P-201ENST00000529436 925 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 OR6M3P-201ENST00000531567 700 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 EGLN3P1-201ENST00000541727 720 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC6.99□□□□□ -1.29
PDGFAP04085 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.99□□□□□ -1.29
PDGFAP04085 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.99□□□□□ -1.29
PDGFAP04085 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.99□□□□□ -1.29
PDGFAP04085 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.99□□□□□ -1.29
PDGFAP04085 MRPS21P9-201ENST00000571150 257 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 VN1R79P-201ENST00000593540 513 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 RPS11-202ENST00000594493 575 ntTSL 3 BASIC6.99□□□□□ -1.29
PDGFAP04085 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.99□□□□□ -1.29
PDGFAP04085 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.99□□□□□ -1.29
PDGFAP04085 AL596327.1-201ENST00000603629 213 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 AP003117.2-201ENST00000606010 545 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 RN7SL715P-201ENST00000606972 286 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 RN7SL778P-201ENST00000607160 297 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 AL354760.1-201ENST00000608357 643 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.99□□□□□ -1.29
PDGFAP04085 ACACA-232ENST00000614438 569 ntTSL 2 BASIC6.99□□□□□ -1.29
PDGFAP04085 AC243830.2-201ENST00000618067 630 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.99□□□□□ -1.29
PDGFAP04085 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
PDGFAP04085 AC093648.1-201ENST00000623546 606 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 AP000648.2-201ENST00000624182 404 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 AC130464.1-201ENST00000416201 1500 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.99□□□□□ -1.29
PDGFAP04085 AL512662.1-201ENST00000624850 2251 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 AC068870.3-201ENST00000625077 2536 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 TRIM60P14-201ENST00000513444 1419 ntBASIC6.99□□□□□ -1.29
PDGFAP04085 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PDGFAP04085 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
PDGFAP04085 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.99□□□□□ -1.29
PDGFAP04085 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC6.99□□□□□ -1.29
PDGFAP04085 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PDGFAP04085 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC6.98□□□□□ -1.29
PDGFAP04085 AP002001.2-201ENST00000529025 1469 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 AC105046.1-201ENST00000566457 4997 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PDGFAP04085 AC090771.1-201ENST00000585803 1618 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 LRRC2-AS1-201ENST00000599511 2291 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
PDGFAP04085 AC016251.2-201ENST00000623393 3089 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PDGFAP04085 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC6.98□□□□□ -1.29
PDGFAP04085 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PDGFAP04085 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PDGFAP04085 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PDGFAP04085 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PDGFAP04085 FAM32BP-201ENST00000344033 333 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PDGFAP04085 Y_RNA.9-201ENST00000362354 101 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 RNU5F-6P-201ENST00000362979 116 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 SNORA73B-201ENST00000363217 204 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 U3.14-201ENST00000365363 227 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
PDGFAP04085 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.98□□□□□ -1.29
PDGFAP04085 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PDGFAP04085 GAS8-AS1-201ENST00000408886 435 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PDGFAP04085 RN7SKP108-201ENST00000411367 328 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PDGFAP04085 AIMP1P1-201ENST00000418670 937 ntBASIC6.98□□□□□ -1.29
PDGFAP04085 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PDGFAP04085 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms