Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC8.2□□□□□ -1.1
ALDH1A1P00352 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
ALDH1A1P00352 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ALDH1A1P00352 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.2□□□□□ -1.1
ALDH1A1P00352 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 OR2AH1P-202ENST00000641232 2744 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AL136146.1-201ENST00000529830 1667 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 Y_RNA.142-201ENST00000363491 102 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 Y_RNA.573-201ENST00000384763 105 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AL356776.1-201ENST00000406574 447 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 ATP5A1P8-201ENST00000423669 1291 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 MTCO2P12-201ENST00000427426 682 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 MTCYBP45-201ENST00000435243 565 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 AL450263.2-201ENST00000439400 589 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AL512593.1-201ENST00000444758 779 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AL627224.1-201ENST00000448334 444 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 AKR1D1P1-201ENST00000457236 936 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 EEF1A1P17-201ENST00000547505 1275 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AL355836.1-201ENST00000555951 870 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 SEPT7P9-203ENST00000604116 343 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AL049541.2-201ENST00000626377 555 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AC138409.1-201ENST00000505001 3598 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 MAPK10-285ENST00000641207 2746 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AL022578.1-201ENST00000439330 1433 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
ALDH1A1P00352 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AC090132.1-201ENST00000524071 1480 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 AC126773.4-201ENST00000612545 3043 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 MTCO1P9-201ENST00000505577 1534 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 AC102941.1-201ENST00000567616 1537 ntBASIC8.19□□□□□ -1.1
ALDH1A1P00352 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ALDH1A1P00352 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ALDH1A1P00352 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 MAPK10-357ENST00000641831 2858 ntBASIC8.18□□□□□ -1.1
ALDH1A1P00352 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ALDH1A1P00352 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ALDH1A1P00352 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 SYF2-202ENST00000354361 926 ntTSL 2 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 RNU6-254P-201ENST00000363377 107 ntBASIC8.18□□□□□ -1.1
ALDH1A1P00352 Y_RNA.216-201ENST00000364205 93 ntBASIC8.18□□□□□ -1.1
ALDH1A1P00352 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 RPS3AP23-201ENST00000401762 784 ntBASIC8.18□□□□□ -1.1
ALDH1A1P00352 AC068533.2-201ENST00000411872 306 ntBASIC8.18□□□□□ -1.1
ALDH1A1P00352 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ALDH1A1P00352 AC005189.1-201ENST00000431286 310 ntBASIC8.18□□□□□ -1.1
ALDH1A1P00352 PSMD10P2-201ENST00000432890 672 ntBASIC8.18□□□□□ -1.1
ALDH1A1P00352 AL954705.1-201ENST00000435277 559 ntBASIC8.18□□□□□ -1.1
ALDH1A1P00352 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.18□□□□□ -1.1
ALDH1A1P00352 SNORA81.1-201ENST00000458922 177 ntBASIC8.18□□□□□ -1.1
ALDH1A1P00352 AP002884.1-201ENST00000479691 655 ntBASIC8.18□□□□□ -1.1
ALDH1A1P00352 AC108688.1-201ENST00000485817 713 ntBASIC8.18□□□□□ -1.1
ALDH1A1P00352 SRP72-202ENST00000504757 745 ntTSL 2 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms