Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL121782.1-201ENST00000611242 413 ntBASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 OR2L1P-202ENST00000641567 1023 ntBASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 AL080317.3-201ENST00000607434 4315 ntBASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.2□□□□□ -1.1
VPS9D1Q9Y2B5 USP44-208ENST00000552440 1818 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC119674.1-202ENST00000641333 1860 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 RNA5SP336-201ENST00000364189 117 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 Y_RNA.339-201ENST00000365325 102 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 RNU1-8P-201ENST00000384328 165 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AL583835.1-201ENST00000399570 407 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AL356432.2-201ENST00000407841 422 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 RN7SKP26-201ENST00000410247 293 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 RBMY2KP-201ENST00000418221 992 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC073335.1-201ENST00000427776 363 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 RPS10P2-201ENST00000430953 494 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 Z83313.1-201ENST00000433780 718 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC104306.1-201ENST00000449702 371 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 PCNPP5-201ENST00000452246 481 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 RPL18AP17-201ENST00000455326 198 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC007967.1-201ENST00000455422 1159 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 RPL5P30-201ENST00000465511 891 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 IGLVI-68-201ENST00000519525 345 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 COX6B1P4-201ENST00000519826 484 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 ATP6V1G1P2-201ENST00000522436 346 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC104117.2-201ENST00000523735 515 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 SUB1P1-201ENST00000524415 382 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC109635.2-202ENST00000529219 500 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC025165.2-201ENST00000549477 699 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC034102.1-201ENST00000552016 604 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC138915.2-201ENST00000569776 97 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC015818.5-201ENST00000578659 356 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 TPMTP1-201ENST00000592307 737 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 SLC25A6P5-202ENST00000602729 1038 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC096861.1-201ENST00000616652 240 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AL122023.1-201ENST00000622847 530 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC005691.1-201ENST00000624723 401 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 MTND5P19-201ENST00000424872 1794 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 HERC2P5-201ENST00000562687 3825 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 AC012360.3-201ENST00000610036 3449 ntBASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VPS9D1Q9Y2B5 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS9D1Q9Y2B5 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms