Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 EPS15P1-202ENST00000459691 2071 ntBASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 RNU4-4P-201ENST00000364588 130 ntBASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 RPSAP35-201ENST00000413753 818 ntBASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 RPS3AP53-201ENST00000454716 778 ntBASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 RPS23P2-201ENST00000463671 415 ntBASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 AC069307.1-201ENST00000602820 447 ntBASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SHROOM4Q9ULL8 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 RPL12P39-201ENST00000455456 496 ntBASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 NDUFAF4P3-201ENST00000456468 525 ntBASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 AC106730.2-201ENST00000566641 540 ntBASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 AC011447.4-201ENST00000587562 111 ntBASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 AL356317.1-201ENST00000396110 1436 ntBASIC10.53□□□□□ -0.72
SHROOM4Q9ULL8 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC10.52□□□□□ -0.72
SHROOM4Q9ULL8 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SHROOM4Q9ULL8 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SHROOM4Q9ULL8 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC10.52□□□□□ -0.72
SHROOM4Q9ULL8 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.72
SHROOM4Q9ULL8 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 USP9YP9-201ENST00000429406 715 ntBASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 AC015864.1-201ENST00000496512 544 ntBASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 AL450226.2-201ENST00000622913 439 ntBASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 SYT14P1-202ENST00000600441 1448 ntBASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 CR1-203ENST00000367051 7469 ntTSL 5 BASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC10.52□□□□□ -0.73
SHROOM4Q9ULL8 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 AC244033.1-201ENST00000426826 870 ntBASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 MIR4311-201ENST00000580794 100 ntBASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 AC093829.1-201ENST00000506662 1618 ntBASIC10.51□□□□□ -0.73
SHROOM4Q9ULL8 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 AC009779.8-201ENST00000641684 4384 ntBASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 TRAV35-201ENST00000390462 330 ntBASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 MTCO3P17-201ENST00000443775 513 ntBASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 AL513533.1-201ENST00000453728 415 ntBASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SHROOM4Q9ULL8 MAL2-208ENST00000523307 556 ntTSL 4 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms