Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC093815.1-201ENST00000508637 280 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 SCARNA16.4-201ENST00000516956 187 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 RNA5SP373-201ENST00000517271 95 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AP004607.2-201ENST00000533949 322 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AL360012.1-201ENST00000602813 131 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC108738.1-201ENST00000603703 237 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AL136295.6-201ENST00000610486 658 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AL162574.1-201ENST00000615702 950 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC109780.1-201ENST00000451768 1344 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC073429.2-201ENST00000569694 1444 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 OR55B1P-203ENST00000641518 2602 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AL592429.1-201ENST00000403909 1473 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 MAX-203ENST00000341653 330 ntTSL 2 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 RNU1-19P-201ENST00000363306 165 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 RNU6-171P-201ENST00000384354 107 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC124944.2-201ENST00000429866 1242 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 BX510359.5-201ENST00000515651 304 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 HMGB1P40-201ENST00000525121 540 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 OR4A46P-201ENST00000527255 933 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC044860.2-201ENST00000561005 179 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 FKBP1AP1-201ENST00000594588 318 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AC118658.2-201ENST00000618697 459 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 AP003400.3-201ENST00000624904 346 ntBASIC7.33□□□□□ -1.24
NPC1L1Q9UHC9 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AL078621.3-201ENST00000623707 2042 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AC097634.1-201ENST00000604491 2467 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 OR4K12P-201ENST00000406538 961 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AC108075.1-201ENST00000424692 529 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 PTMAP6-201ENST00000439110 327 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AC009963.4-201ENST00000448535 339 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 CBX1P5-201ENST00000475330 559 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AC111000.6-201ENST00000514471 709 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 OR8G3P-201ENST00000533406 921 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 YWHABP2-201ENST00000540201 713 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 RPL10P14-201ENST00000565265 298 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 MIR1269B-201ENST00000580405 75 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AL049840.6-202ENST00000603373 279 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 MIR6837-201ENST00000620884 64 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 SAMMSON-209ENST00000641222 1100 ntBASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPC1L1Q9UHC9 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 AC092681.1-201ENST00000297369 291 ntBASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 RNU1-77P-201ENST00000390868 162 ntBASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 RNU4-34P-201ENST00000410431 124 ntBASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 AL133482.1-201ENST00000415988 498 ntBASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 AC017019.1-201ENST00000426129 261 ntBASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 GAPDHP58-201ENST00000438477 1006 ntBASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 AC090804.1-201ENST00000448870 490 ntBASIC7.31□□□□□ -1.24
NPC1L1Q9UHC9 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms