Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 RN7SKP151-201ENST00000410230 316 ntBASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 AC010326.1-201ENST00000462726 602 ntBASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 OR5M2P-201ENST00000529003 936 ntBASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 ARL6IP1P1-201ENST00000545836 610 ntBASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RIMBP3Q9UFD9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 MIR640-201ENST00000385086 96 ntBASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 MIR1182-201ENST00000408363 97 ntBASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 RN7SL423P-201ENST00000486202 304 ntBASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 AC012339.2-201ENST00000523996 453 ntBASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 AC013731.1-201ENST00000604340 883 ntBASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 AC090220.1-201ENST00000593078 1699 ntBASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
RIMBP3Q9UFD9 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 RNU1-24P-201ENST00000364285 165 ntBASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 AC011276.1-201ENST00000469688 323 ntBASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 AC017100.2-201ENST00000584628 355 ntBASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 SAMMSON-226ENST00000642089 1582 ntBASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.41□□□□□ -1.06
RIMBP3Q9UFD9 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 AL009179.1-201ENST00000406085 265 ntBASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 TEX41-203ENST00000420472 765 ntTSL 3 BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 CEACAMP6-201ENST00000452007 574 ntBASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 AL356390.1-201ENST00000455684 397 ntBASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 MRPS33P2-201ENST00000507850 322 ntBASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 AC024589.2-201ENST00000605642 1294 ntBASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 UBA3-213ENST00000631029 123 ntTSL 5 BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 AL353796.1-201ENST00000561542 3241 ntBASIC8.4□□□□□ -1.06
RIMBP3Q9UFD9 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RIMBP3Q9UFD9 DBIP1-201ENST00000401435 260 ntBASIC8.4□□□□□ -1.07
RIMBP3Q9UFD9 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.4□□□□□ -1.07
RIMBP3Q9UFD9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC8.4□□□□□ -1.07
RIMBP3Q9UFD9 AL596266.1-201ENST00000448132 400 ntBASIC8.4□□□□□ -1.07
RIMBP3Q9UFD9 AC058823.1-201ENST00000485315 474 ntBASIC8.4□□□□□ -1.07
RIMBP3Q9UFD9 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC8.4□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms