Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 LINC02495-203ENST00000636704 242 ntBASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 NAMPTP1-201ENST00000440465 2514 ntBASIC5.7□□□□□ -1.5
NKX1-2Q9UD57 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC015689.2-201ENST00000528172 1738 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 RNU5B-4P-201ENST00000363508 111 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 PDCL3P5-201ENST00000398028 722 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 RN7SKP166-201ENST00000410812 305 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AL121878.1-201ENST00000418638 859 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 PPIL1P1-201ENST00000423936 499 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 CRIP1P1-201ENST00000427567 185 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 RPL14P5-201ENST00000436474 730 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 FABP5P3-201ENST00000437960 408 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC027124.1-201ENST00000440852 466 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 CCNJP1-201ENST00000450600 1149 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 SNORA35.1-201ENST00000458908 128 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC079080.1-201ENST00000479841 822 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 RPL21P47-201ENST00000483696 477 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AL158068.1-201ENST00000506116 616 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 IGKV1D-32-201ENST00000517449 318 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC069240.2-201ENST00000550242 609 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC026956.1-201ENST00000558741 396 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 WDR45BP1-201ENST00000583470 1029 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 DYNLL1P1-201ENST00000595442 269 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 RPP40P2-201ENST00000603596 712 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC009974.1-201ENST00000608881 455 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AL157392.4-201ENST00000609756 345 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC009159.2-201ENST00000617603 606 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC010401.2-201ENST00000575137 4934 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 MTND5P11-201ENST00000511037 1812 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 ICE2P1-201ENST00000512800 1849 ntBASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX1-2Q9UD57 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NKX1-2Q9UD57 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.68□□□□□ -1.5
NKX1-2Q9UD57 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX1-2Q9UD57 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX1-2Q9UD57 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NKX1-2Q9UD57 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX1-2Q9UD57 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX1-2Q9UD57 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX1-2Q9UD57 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX1-2Q9UD57 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
NKX1-2Q9UD57 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms