Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.71□□□□□ -1.5
SPASTQ9UBP0 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.71□□□□□ -1.5
SPASTQ9UBP0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.71□□□□□ -1.5
SPASTQ9UBP0 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.71□□□□□ -1.5
SPASTQ9UBP0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.71□□□□□ -1.5
SPASTQ9UBP0 AP000864.1-201ENST00000609424 650 ntBASIC5.71□□□□□ -1.5
SPASTQ9UBP0 AC007683.2-201ENST00000624681 714 ntBASIC5.71□□□□□ -1.5
SPASTQ9UBP0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SPASTQ9UBP0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SPASTQ9UBP0 AL161912.4-201ENST00000623889 2468 ntBASIC5.71□□□□□ -1.5
SPASTQ9UBP0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.71□□□□□ -1.5
SPASTQ9UBP0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SPASTQ9UBP0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SPASTQ9UBP0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 BX119904.3-201ENST00000428194 957 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AC005297.1-201ENST00000444765 862 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 NPM1P19-201ENST00000450070 712 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 FRG2FP-204ENST00000453982 852 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AC239798.3-201ENST00000454459 408 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AL603882.1-201ENST00000463059 681 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 TRBV5-2-201ENST00000489095 273 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 MTCO3P42-201ENST00000509488 518 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 MTCO3P39-201ENST00000514812 518 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 IGLV3-30-201ENST00000524362 298 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AP001357.1-201ENST00000586304 1053 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AC008115.3-201ENST00000614874 549 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 CU639417.4-201ENST00000623928 207 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AL390318.1-201ENST00000624564 687 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AC022919.1-201ENST00000624979 626 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AC073869.7-201ENST00000640874 297 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 AC020633.1-201ENST00000468439 2247 ntBASIC5.7□□□□□ -1.5
SPASTQ9UBP0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SPASTQ9UBP0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 AC123769.1-201ENST00000530992 3192 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 Y_RNA.62-201ENST00000362840 99 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 RNU6-1331P-201ENST00000363658 106 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 RMRPP5-201ENST00000411156 267 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 RNU2-22P-201ENST00000411266 212 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 AL445213.1-201ENST00000412589 747 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 PTP4A1P1-201ENST00000420539 515 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 RPS12P17-201ENST00000438591 377 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 AC026348.1-201ENST00000462549 1053 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 SNORD116-30-201ENST00000516468 85 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 AP002981.1-201ENST00000517692 975 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 MIR4489-201ENST00000578869 62 ntBASIC5.69□□□□□ -1.5
SPASTQ9UBP0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SPASTQ9UBP0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms