Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC097063.1-201ENST00000426714 1797 ntBASIC5.46□□□□□ -1.54
TREX1Q9NSU2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC004656.1-201ENST00000568479 4951 ntBASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 BRAFP1-201ENST00000445336 2703 ntBASIC5.46□□□□□ -1.54
TREX1Q9NSU2 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TREX1Q9NSU2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 SNORA16A-201ENST00000384342 137 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 RNA5SP122-201ENST00000384457 108 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 OR2AT2P-201ENST00000413438 905 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 OR6E1P-201ENST00000414424 923 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AKR1B10P1-201ENST00000425765 942 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AC017019.1-201ENST00000426129 261 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AL136231.1-201ENST00000429407 730 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AC064862.4-201ENST00000442180 334 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AC090804.1-201ENST00000448870 490 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AC109481.1-201ENST00000509173 282 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AP004609.2-201ENST00000532177 190 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AC244107.2-201ENST00000611773 76 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 RNF19BPY-201ENST00000458209 1550 ntBASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.45□□□□□ -1.54
TREX1Q9NSU2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 MIR133A2-201ENST00000347538 102 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 RNU4-2-201ENST00000365668 141 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 GABARAPL3-201ENST00000412799 354 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 RPL7AP49-201ENST00000429522 581 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 RPL12P17-201ENST00000432393 498 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AL591438.1-201ENST00000433508 581 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AC016772.1-201ENST00000444170 1261 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 SNRPCP3-201ENST00000474888 476 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AP000797.2-201ENST00000475768 606 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AC074087.1-201ENST00000512059 724 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 MTND6P2-201ENST00000512226 524 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 HMGN1P9-201ENST00000515212 298 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AC132068.1-201ENST00000623805 459 ntBASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.44□□□□□ -1.54
TREX1Q9NSU2 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms