Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 PSG10P-201ENST00000501199 1500 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AC092111.2-201ENST00000611627 1414 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 SELENOWP1-201ENST00000322792 252 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AC005042.1-201ENST00000393397 800 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 VN1R12P-201ENST00000403778 876 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AC099535.1-201ENST00000408928 371 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AL034379.1-201ENST00000423216 253 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 NXT1P1-201ENST00000458481 316 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 LDHAP1-201ENST00000509421 992 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 GAPDHP71-201ENST00000511530 1003 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 SCARNA18.1-201ENST00000516330 83 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 TMEM97P2-201ENST00000517841 403 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 IGKV3D-25-201ENST00000519599 235 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AC008126.1-201ENST00000549019 480 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 CYCSP38-201ENST00000559840 322 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AL136228.1-201ENST00000622221 319 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 HSPA8P14-201ENST00000552265 1805 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AC018809.2-201ENST00000602436 3823 ntBASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNB1IP1Q9NPC3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AC012512.1-201ENST00000446594 718 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 ACA64.1-201ENST00000459171 127 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 RPS23P2-201ENST00000463671 415 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 RN7SL269P-201ENST00000467795 305 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 RN7SL741P-201ENST00000482473 289 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 RN7SL170P-201ENST00000487098 295 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AP000859.1-201ENST00000525536 307 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 LSM3P2-201ENST00000551246 273 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 DHFRP1-201ENST00000579682 559 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 MIR4776-2-201ENST00000580204 80 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 MIR4271-201ENST00000582451 67 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AL136131.3-201ENST00000607600 188 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 uc_338.7-201ENST00000621834 124 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AC025262.3-201ENST00000623666 360 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AC129778.1-202ENST00000623812 261 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AL591379.1-207ENST00000635982 261 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCNB1IP1Q9NPC3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms