Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VTA1Q9NP79 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VTA1Q9NP79 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.81□□□□□ -1.32
VTA1Q9NP79 HSPD1P7-201ENST00000447985 1686 ntBASIC6.81□□□□□ -1.32
VTA1Q9NP79 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 SELENOWP1-201ENST00000322792 252 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 U3.25-201ENST00000391209 220 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 SNRPEP6-201ENST00000407465 277 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 NENFP1-201ENST00000419476 466 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AC093155.2-201ENST00000420734 937 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 RRM2P4-201ENST00000441721 562 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AP000281.1-201ENST00000444036 316 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 RPL23AP60-201ENST00000450011 454 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AL451063.1-201ENST00000450164 1133 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 AL136038.1-201ENST00000497246 351 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 RPL7L1P4-201ENST00000513004 707 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 SNORA70.20-201ENST00000516848 126 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 CIR1P1-201ENST00000524055 1133 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 AC006530.1-201ENST00000555980 571 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AGGF1P9-201ENST00000561884 913 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AL049838.1-201ENST00000563647 981 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 RPL12P48-201ENST00000605620 304 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AL021918.2-201ENST00000613415 194 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 AC003992.1-201ENST00000635364 557 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AL049767.1-202ENST00000637826 242 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 AC092692.1-201ENST00000623625 2595 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 AC003985.2-201ENST00000562268 1669 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 AL355377.1-201ENST00000621125 1653 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
VTA1Q9NP79 AC034229.2-201ENST00000566945 2508 ntBASIC6.8□□□□□ -1.32
VTA1Q9NP79 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
VTA1Q9NP79 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC008432.1-201ENST00000615912 1320 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VTA1Q9NP79 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VTA1Q9NP79 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VTA1Q9NP79 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VTA1Q9NP79 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VTA1Q9NP79 RNA5SP333-201ENST00000363466 118 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 RNA5SP334-201ENST00000364825 118 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC234772.1-201ENST00000377927 937 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 RNU6-354P-201ENST00000383862 107 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 RNU6-468P-201ENST00000384003 109 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 RNU6-610P-201ENST00000384264 107 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 MIR143-201ENST00000385300 106 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 HMGB1P10-201ENST00000395823 563 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC017078.1-201ENST00000416146 368 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 HYALP1-201ENST00000417674 1279 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 RPS26P13-201ENST00000419030 330 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC241520.1-201ENST00000422654 1099 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 VN1R42P-201ENST00000424651 344 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 AL121776.1-201ENST00000429337 372 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms