Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 MIR6883-201ENST00000614952 78 ntBASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 AL357153.4-201ENST00000620487 1016 ntBASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 PDZK1P1-202ENST00000425209 1350 ntBASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC28BQ9BUN5 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 RBPJP2-201ENST00000618187 1444 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 OR55B1P-203ENST00000641518 2602 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AL009179.1-201ENST00000406085 265 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 NENFP1-201ENST00000419476 466 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 YY1P1-201ENST00000427625 668 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 RPS19P6-201ENST00000441327 433 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 HMGB1P7-201ENST00000450921 612 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 CFL1P4-201ENST00000451536 498 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC245028.2-201ENST00000458673 253 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AL122020.1-201ENST00000472287 459 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 MTCO1P55-201ENST00000489829 745 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 RN7SL362P-201ENST00000494228 267 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 SETP21-201ENST00000514799 892 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 RNA5SP96-201ENST00000516041 107 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC021678.3-201ENST00000517893 476 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC092709.1-201ENST00000521355 1045 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AL356801.1-201ENST00000559320 294 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC090774.2-201ENST00000584708 322 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 WBP1LP12-201ENST00000604449 331 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AL365181.4-201ENST00000609800 547 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC004801.6-201ENST00000616571 978 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC245014.3-201ENST00000618589 347 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 AC022106.2-201ENST00000620114 757 ntBASIC5.4□□□□□ -1.54
CCDC28BQ9BUN5 SMG1P4-204ENST00000523028 4131 ntBASIC5.4□□□□□ -1.55
CCDC28BQ9BUN5 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC28BQ9BUN5 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC28BQ9BUN5 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC28BQ9BUN5 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC28BQ9BUN5 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.4□□□□□ -1.55
CCDC28BQ9BUN5 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.4□□□□□ -1.55
CCDC28BQ9BUN5 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 RNA5SP30-201ENST00000365552 115 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC007618.1-201ENST00000366455 732 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 OR1L6-202ENST00000373684 1044 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 SNORA51.9-201ENST00000384295 124 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC005522.1-201ENST00000395416 346 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 YWHAZP6-201ENST00000399764 738 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 RPS6P23-201ENST00000413224 722 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AL354890.1-201ENST00000413730 346 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 MRPL53P1-201ENST00000414323 319 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC017019.1-201ENST00000426129 261 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC007679.3-201ENST00000434035 414 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AC092447.2-201ENST00000435487 669 ntBASIC5.39□□□□□ -1.55
CCDC28BQ9BUN5 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms