Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC068213.1-201ENST00000625124 226 ntBASIC5.8□□□□□ -1.48
VRK1Q99986 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.8□□□□□ -1.48
VRK1Q99986 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.8□□□□□ -1.48
VRK1Q99986 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VRK1Q99986 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VRK1Q99986 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
VRK1Q99986 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VRK1Q99986 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
VRK1Q99986 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.8□□□□□ -1.48
VRK1Q99986 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VRK1Q99986 FANCD2P2-201ENST00000437591 1400 ntBASIC5.8□□□□□ -1.48
VRK1Q99986 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.8□□□□□ -1.48
VRK1Q99986 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.8□□□□□ -1.48
VRK1Q99986 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.8□□□□□ -1.48
VRK1Q99986 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
VRK1Q99986 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
VRK1Q99986 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.79□□□□□ -1.48
VRK1Q99986 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.79□□□□□ -1.48
VRK1Q99986 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.79□□□□□ -1.48
VRK1Q99986 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.79□□□□□ -1.48
VRK1Q99986 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.79□□□□□ -1.48
VRK1Q99986 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
VRK1Q99986 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 FAM32BP-201ENST00000344033 333 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 RNU1-5P-201ENST00000362684 144 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 RNU6-532P-201ENST00000384318 107 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VRK1Q99986 RNA5SP474-201ENST00000391234 90 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 UBBP1-201ENST00000392399 473 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.79□□□□□ -1.48
VRK1Q99986 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 FCF1P5-201ENST00000406490 482 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.79□□□□□ -1.48
VRK1Q99986 TCEA1P4-201ENST00000415066 844 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.79□□□□□ -1.48
VRK1Q99986 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK1Q99986 AL356320.2-201ENST00000417263 507 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AC234781.4-201ENST00000419384 244 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.79□□□□□ -1.48
VRK1Q99986 FAM183DP-201ENST00000421987 399 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 GTF2IP2-201ENST00000424290 697 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 DPY19L1P2-201ENST00000426647 915 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AC097721.1-201ENST00000427150 1253 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 GAPDHP19-201ENST00000431768 1005 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK1Q99986 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK1Q99986 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 RPSAP40-201ENST00000442343 891 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AC245291.3-201ENST00000443400 292 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 OR6K5P-201ENST00000447050 945 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 RPL23AP28-201ENST00000448062 470 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AL121578.2-201ENST00000448797 447 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.79□□□□□ -1.48
VRK1Q99986 AC099670.1-201ENST00000455141 783 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AKR1D1P1-201ENST00000457236 936 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 RBMY2HP-201ENST00000457961 720 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 RN7SL83P-201ENST00000468131 297 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 RPS3AP49-201ENST00000472161 790 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.79□□□□□ -1.48
VRK1Q99986 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VRK1Q99986 RN7SL187P-201ENST00000495587 303 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.79□□□□□ -1.48
VRK1Q99986 RPL5P23-201ENST00000496040 868 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 RN7SL143P-201ENST00000496780 297 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 RN7SL649P-201ENST00000496974 275 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 SUMO2P4-201ENST00000504193 276 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 HPRT1P2-201ENST00000505250 544 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK1Q99986 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK1Q99986 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK1Q99986 OR4A6P-201ENST00000534364 970 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 TDGP1-201ENST00000543961 1229 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK1Q99986 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK1Q99986 GARSP1-201ENST00000570895 719 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AC008088.1-201ENST00000580993 280 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.79□□□□□ -1.48
VRK1Q99986 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK1Q99986 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.79□□□□□ -1.48
VRK1Q99986 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.79□□□□□ -1.48
VRK1Q99986 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.79□□□□□ -1.48
VRK1Q99986 AC009948.4-201ENST00000604692 675 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AC009237.12-201ENST00000604755 742 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AL590032.1-201ENST00000604920 252 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.79□□□□□ -1.48
VRK1Q99986 MIR6780B-201ENST00000610307 79 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
VRK1Q99986 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.79□□□□□ -1.48
VRK1Q99986 AC006328.2-201ENST00000623198 397 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AC026422.1-201ENST00000623961 452 ntBASIC5.79□□□□□ -1.48
VRK1Q99986 AC012005.2-201ENST00000624333 397 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms