Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC4.09□□□□□ -1.75
LITAFQ99732 FRG2IP-201ENST00000563581 781 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.09□□□□□ -1.75
LITAFQ99732 RNU4ATAC-201ENST00000580972 127 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC015802.2-201ENST00000589690 189 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AP001120.4-201ENST00000590231 108 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 AL589765.5-201ENST00000596133 515 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC146944.4-201ENST00000602697 718 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC104117.5-201ENST00000606195 547 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 SNORD96A-201ENST00000606577 79 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AC108865.2-201ENST00000606881 432 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC4.09□□□□□ -1.75
LITAFQ99732 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC138904.2-201ENST00000614412 107 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 AC010975.3-201ENST00000618727 978 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AL137067.2-201ENST00000621202 131 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 AL121594.5-201ENST00000631724 573 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 AL513523.1-201ENST00000417868 1309 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 AC017007.4-201ENST00000503353 1352 ntBASIC4.09□□□□□ -1.75
LITAFQ99732 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LITAFQ99732 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LITAFQ99732 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.09□□□□□ -1.76
LITAFQ99732 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
LITAFQ99732 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LITAFQ99732 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LITAFQ99732 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LITAFQ99732 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LITAFQ99732 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
LITAFQ99732 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
LITAFQ99732 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.09□□□□□ -1.76
LITAFQ99732 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LITAFQ99732 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
LITAFQ99732 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
LITAFQ99732 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LITAFQ99732 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 RNA5SP382-201ENST00000363355 112 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 SNORA43.1-201ENST00000364863 140 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.08□□□□□ -1.76
LITAFQ99732 Y_RNA.472-201ENST00000384322 102 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 Y_RNA.578-201ENST00000390903 88 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 RNA5SP105-201ENST00000391123 113 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 AC087752.1-201ENST00000391360 558 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 AC245036.1-201ENST00000391727 309 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC4.08□□□□□ -1.76
LITAFQ99732 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.08□□□□□ -1.76
LITAFQ99732 ZNF876P-202ENST00000398732 1485 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 AL034403.1-201ENST00000399414 885 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LITAFQ99732 RN7SKP279-201ENST00000411383 298 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC4.08□□□□□ -1.76
LITAFQ99732 AC079809.1-201ENST00000415468 276 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.08□□□□□ -1.76
LITAFQ99732 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC4.08□□□□□ -1.76
LITAFQ99732 MTND2P18-201ENST00000419962 1030 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC4.08□□□□□ -1.76
LITAFQ99732 AL034379.1-201ENST00000423216 253 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.08□□□□□ -1.76
LITAFQ99732 RPS4XP16-201ENST00000427198 791 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 AL136231.1-201ENST00000429407 730 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 AC242426.1-201ENST00000435270 960 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 MTCYBP12-201ENST00000440559 1134 ntBASIC4.08□□□□□ -1.76
LITAFQ99732 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms