Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 RN7SKP28-201ENST00000364770 305 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 RNA5SP85-201ENST00000365378 119 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 RN7SKP187-201ENST00000365536 330 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 RNU6-298P-201ENST00000390888 96 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 MTND4P13-201ENST00000402078 1023 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 RN7SKP281-201ENST00000410472 352 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL592310.1-201ENST00000414330 671 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 THEM7P-201ENST00000419556 672 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC005005.2-201ENST00000420779 380 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC007562.1-201ENST00000421819 517 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 XKRYP1-201ENST00000423438 492 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 VN1R42P-201ENST00000424651 344 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 RPSAP32-201ENST00000432681 526 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 XKRYP2-201ENST00000432915 492 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 SETP8-201ENST00000435341 628 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL138899.2-201ENST00000439139 499 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 GAPDHP37-201ENST00000442317 968 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC023274.2-201ENST00000445264 521 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 EIF2S2P2-201ENST00000447161 982 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 HMGB1P26-201ENST00000452520 628 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 CTSLP6-201ENST00000458273 1002 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 RN7SL568P-201ENST00000493069 298 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC082651.2-201ENST00000496833 166 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC008427.1-201ENST00000503102 655 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 BCAS2P1-201ENST00000528022 632 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 RPA2P3-201ENST00000533268 770 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL121839.1-201ENST00000556233 1185 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 NIFKP6-201ENST00000598115 845 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC022022.2-201ENST00000602989 360 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL022394.1-201ENST00000606979 292 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 SNORA74.4-201ENST00000607595 199 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL359091.2-201ENST00000609303 556 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC084782.3-201ENST00000612282 578 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL355493.4-201ENST00000618530 292 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 MIR7159-201ENST00000620587 66 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AC116667.2-201ENST00000641075 823 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 FBXL21-201ENST00000297158 1305 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX18Q96RF0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SNX18Q96RF0 AL731532.1-201ENST00000623972 4236 ntBASIC5.66□□□□□ -1.5
SNX18Q96RF0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX18Q96RF0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNX18Q96RF0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNX18Q96RF0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX18Q96RF0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX18Q96RF0 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNX18Q96RF0 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX18Q96RF0 AL136984.1-201ENST00000607611 1893 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms