Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL136455.1-201ENST00000441083 1240 ntBASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 AP005403.1-201ENST00000579720 229 ntBASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 OR4K15-201ENST00000305051 1216 ntBASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 RPEP3-201ENST00000425462 676 ntBASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 GSTM5P1-201ENST00000434751 660 ntBASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 RPL7AP52-201ENST00000458096 790 ntBASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 SNORA59A-201ENST00000459326 152 ntBASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 IGHVIII-13-1-201ENST00000517613 291 ntBASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CSMD1Q96PZ7 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 RNA5SP326-201ENST00000363209 110 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 RNA5SP28-201ENST00000363841 119 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AL731534.1-201ENST00000434711 269 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AL162739.1-201ENST00000450606 307 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 RPL12P39-201ENST00000455456 496 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 RPL7P32-201ENST00000457119 744 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 NIP7P2-201ENST00000485801 544 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AP001880.2-201ENST00000538233 448 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 RN7SL356P-201ENST00000582228 248 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AC099654.2-201ENST00000433031 1980 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 RNU6-761P-201ENST00000384148 107 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 U3.30-201ENST00000391308 210 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 CASKP1-201ENST00000412870 582 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 RPL21P108-201ENST00000413857 481 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 USP24P1-201ENST00000433802 779 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AL445687.2-201ENST00000458156 728 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 NDUFB4P12-201ENST00000513465 390 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 RNA5SP43-201ENST00000516559 110 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 MIR3124-201ENST00000582636 67 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AP001324.1-201ENST00000428553 399 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AL672138.1-201ENST00000450604 1015 ntBASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.44□□□□□ -1.7
CSMD1Q96PZ7 AL121873.1-201ENST00000616013 524 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms