Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 AC068870.1-201ENST00000563737 2455 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL21A1Q96P44 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL21A1Q96P44 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 MRRFP1-201ENST00000435941 1675 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL21A1Q96P44 AC092376.2-201ENST00000622621 4116 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 AC097063.1-201ENST00000426714 1797 ntBASIC5.27□□□□□ -1.57
COL21A1Q96P44 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
COL21A1Q96P44 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 U3.7-201ENST00000363668 216 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 HMGB1P20-201ENST00000402555 677 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 MGAT2P2-201ENST00000427194 797 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 BX119321.1-201ENST00000428912 797 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 RPS29P14-201ENST00000431518 171 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 RPL23AP19-201ENST00000436229 369 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 RPL12P18-201ENST00000437175 325 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 AC073109.1-201ENST00000445066 978 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 AC073610.1-201ENST00000489971 396 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 CYCSP22-201ENST00000517555 339 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 AC022826.1-201ENST00000519383 805 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 OR4A17P-201ENST00000526032 904 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 IGBP1P1-201ENST00000554337 1009 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 AL390318.1-201ENST00000624564 687 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 MIR193BHG-214ENST00000641765 509 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 OR13C1P-202ENST00000641378 2919 ntBASIC5.26□□□□□ -1.57
COL21A1Q96P44 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.26□□□□□ -1.57
COL21A1Q96P44 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL21A1Q96P44 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 AC005005.4-201ENST00000623789 16698 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 RNA5SP394-201ENST00000364216 119 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 U3.28-201ENST00000391249 210 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 RPS6P23-201ENST00000413224 722 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 RNF10P1-201ENST00000418589 369 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 RPL34P3-201ENST00000421454 338 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 LINC02210-201ENST00000444561 288 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 LRRC37A14P-201ENST00000452297 462 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 NXT1P1-201ENST00000458481 316 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 RPS23P6-201ENST00000466136 431 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 RPL12P24-201ENST00000474907 486 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 ATP5LP5-201ENST00000483050 299 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 MORF4L2P1-201ENST00000503761 858 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 RNU6-615P-201ENST00000516065 106 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 AC122688.1-201ENST00000541494 223 ntBASIC5.25□□□□□ -1.57
COL21A1Q96P44 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.25□□□□□ -1.57
COL21A1Q96P44 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms