Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 OR5AM1P-201ENST00000532136 1032 ntBASIC5.71□□□□□ -1.5
C9orf72Q96LT7 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C9orf72Q96LT7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 SDHDP6-201ENST00000414693 480 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 HYALP1-201ENST00000417674 1279 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AZGP1P2-201ENST00000454506 345 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 RN7SL570P-201ENST00000484405 292 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 DUTP7-201ENST00000507982 486 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 LDHBP3-201ENST00000514909 822 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC112191.2-201ENST00000522428 333 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 PMS2P3-207ENST00000529061 717 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC027544.3-201ENST00000535082 757 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 HSPE1P2-201ENST00000554777 306 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC020978.7-201ENST00000575953 1187 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AP001496.3-201ENST00000580230 913 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC009237.13-201ENST00000603193 276 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AL022394.1-201ENST00000606979 292 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC090607.5-201ENST00000615692 224 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC022919.1-201ENST00000624979 626 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC002525.1-201ENST00000624392 1622 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.7□□□□□ -1.5
C9orf72Q96LT7 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf72Q96LT7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AP000473.2-201ENST00000602659 1537 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AC005261.6-201ENST00000623072 1387 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 GAPDHP24-201ENST00000328713 983 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 RNA5SP187-201ENST00000384400 119 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 RN7SKP286-201ENST00000410894 299 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 CYCSP51-201ENST00000443545 318 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 RPSAP37-201ENST00000470913 821 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AC009120.1-201ENST00000493458 473 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 SCARNA6.1-201ENST00000516989 238 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 TMEM97P2-201ENST00000517841 403 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AC021678.3-201ENST00000517893 476 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 HMGN2P36-201ENST00000529541 409 ntBASIC5.69□□□□□ -1.5
C9orf72Q96LT7 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.69□□□□□ -1.5
C9orf72Q96LT7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms