Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 RNA5SP433-201ENST00000364491 114 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 RNA5SP30-201ENST00000365552 115 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AC104297.1-201ENST00000393779 870 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AC240504.1-201ENST00000395709 845 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 RNU2-18P-201ENST00000411224 162 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 BX323845.3-201ENST00000428215 527 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 NXT1P1-201ENST00000458481 316 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 PSMA2P2-201ENST00000504319 686 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AK4P6-201ENST00000505168 528 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 DPPA2P4-201ENST00000563717 878 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AC027281.1-201ENST00000574178 758 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 AC108865.2-201ENST00000606881 432 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 FO681491.1-202ENST00000623392 737 ntBASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PDLIM5Q96HC4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 RNA5SP326-201ENST00000363209 110 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 CXADRP1-201ENST00000398098 1095 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 HMGB3P7-201ENST00000400214 611 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AC099535.1-201ENST00000408928 371 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AC066692.1-201ENST00000421721 457 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 MTND4LP13-201ENST00000425022 298 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 RPL31P20-201ENST00000449593 360 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AC090602.1-201ENST00000469695 252 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AC022215.1-201ENST00000481770 362 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 RN7SL649P-201ENST00000496974 275 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 IGLV3-24-201ENST00000517477 197 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 PMS2P3-207ENST00000529061 717 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AC122688.1-201ENST00000541494 223 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 HSPE1P2-201ENST00000554777 306 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 RN7SL544P-201ENST00000617232 284 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 CXADRP3-202ENST00000617265 1100 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 RN7SL763P-201ENST00000620922 284 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AC002044.3-201ENST00000623314 541 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 AC097461.1-201ENST00000568928 2821 ntBASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM5Q96HC4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDLIM5Q96HC4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms