Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 UGT2A3P7-201ENST00000510485 734 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC093770.1-201ENST00000511559 571 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 OSBPL9P3-201ENST00000534523 595 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC106785.3-201ENST00000564064 847 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC008521.2-201ENST00000591021 259 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 BNIP3P35-201ENST00000604530 490 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC026790.2-201ENST00000606282 430 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC242628.1-201ENST00000606810 391 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC096861.1-201ENST00000616652 240 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 AC024884.1-201ENST00000620583 399 ntBASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CHMP4CQ96CF2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 LINC02019-201ENST00000608605 2060 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 RN7SKP269-201ENST00000365545 319 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 SUGT1P2-201ENST00000379452 992 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AC245096.1-201ENST00000413104 546 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 SETP9-201ENST00000423837 832 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AC021876.1-201ENST00000425959 359 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 NDUFS5P5-201ENST00000437256 321 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AC245517.2-201ENST00000442890 346 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AC073109.1-201ENST00000445066 978 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 EIF2S2P5-201ENST00000457635 968 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 ACA64.1-201ENST00000459171 127 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AC078857.1-201ENST00000469870 667 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AC090568.1-201ENST00000509499 856 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 SNORA76.2-201ENST00000517095 137 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 MIR4310-201ENST00000582950 57 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 ZNF92P2-201ENST00000600543 1059 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AC025016.1-201ENST00000616746 682 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AL355974.3-201ENST00000617383 467 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 OR5AC4P-202ENST00000642086 985 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 AC092111.2-201ENST00000611627 1414 ntBASIC7.1□□□□□ -1.27
CHMP4CQ96CF2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 AC010132.2-201ENST00000295493 1043 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 RN7SKP78-201ENST00000364711 318 ntBASIC7.09□□□□□ -1.27
CHMP4CQ96CF2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms