Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
AP3S1Q92572 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP3S1Q92572 AL672167.1-204ENST00000641875 3017 ntBASIC4.8□□□□□ -1.64
AP3S1Q92572 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.8□□□□□ -1.64
AP3S1Q92572 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
AP3S1Q92572 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
AP3S1Q92572 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S1Q92572 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S1Q92572 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.79□□□□□ -1.64
AP3S1Q92572 OR9G4-201ENST00000302957 984 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S1Q92572 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S1Q92572 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AP3S1Q92572 RNU4-44P-201ENST00000363050 141 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 RN7SKP153-201ENST00000365026 316 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 RNA5SP77-201ENST00000365394 120 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AP3S1Q92572 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 RPSAP35-201ENST00000413753 818 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S1Q92572 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S1Q92572 AL389925.1-201ENST00000432257 728 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 AC046176.1-201ENST00000435260 1170 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S1Q92572 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S1Q92572 AL031584.1-201ENST00000447169 754 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S1Q92572 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.79□□□□□ -1.64
AP3S1Q92572 RPL7AP10-201ENST00000481016 791 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 RN7SL591P-201ENST00000496150 292 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 AC105391.1-201ENST00000503155 1045 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S1Q92572 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.79□□□□□ -1.64
AP3S1Q92572 AC138938.1-201ENST00000515431 782 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 RN7SKP46-201ENST00000515942 234 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S1Q92572 AC009879.1-201ENST00000520029 839 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S1Q92572 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S1Q92572 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S1Q92572 AC084759.1-201ENST00000561168 290 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 AC011840.5-201ENST00000582125 771 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S1Q92572 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.79□□□□□ -1.64
AP3S1Q92572 TAS2R6P-201ENST00000605022 826 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 AC037198.3-201ENST00000616754 526 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 AC015914.2-201ENST00000618167 288 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S1Q92572 BX005214.3-202ENST00000619809 325 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 MIR6839-201ENST00000620425 113 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 AC117503.3-201ENST00000623811 601 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 AC073869.10-201ENST00000642016 354 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S1Q92572 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S1Q92572 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.79□□□□□ -1.64
AP3S1Q92572 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
AP3S1Q92572 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.79□□□□□ -1.64
AP3S1Q92572 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.79□□□□□ -1.64
AP3S1Q92572 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.79□□□□□ -1.64
AP3S1Q92572 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP3S1Q92572 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
AP3S1Q92572 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S1Q92572 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
AP3S1Q92572 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S1Q92572 PSG10P-201ENST00000501199 1500 ntBASIC4.78□□□□□ -1.64
AP3S1Q92572 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
AP3S1Q92572 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.78□□□□□ -1.64
AP3S1Q92572 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S1Q92572 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.78□□□□□ -1.64
AP3S1Q92572 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S1Q92572 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
AP3S1Q92572 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
AP3S1Q92572 RN7SKP29-201ENST00000410957 272 ntBASIC4.78□□□□□ -1.64
AP3S1Q92572 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.78□□□□□ -1.64
AP3S1Q92572 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC4.78□□□□□ -1.64
AP3S1Q92572 OR2AH1P-201ENST00000425717 928 ntBASIC4.78□□□□□ -1.64
AP3S1Q92572 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.78□□□□□ -1.64
AP3S1Q92572 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S1Q92572 GAPDHP48-201ENST00000436626 961 ntBASIC4.78□□□□□ -1.64
AP3S1Q92572 AC010086.1-201ENST00000437359 1052 ntBASIC4.78□□□□□ -1.64
AP3S1Q92572 GEMIN2P1-201ENST00000454246 752 ntBASIC4.78□□□□□ -1.64
AP3S1Q92572 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.78□□□□□ -1.64
AP3S1Q92572 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.78□□□□□ -1.64
AP3S1Q92572 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.78□□□□□ -1.64
AP3S1Q92572 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.78□□□□□ -1.64
AP3S1Q92572 AP002453.1-201ENST00000492327 668 ntBASIC4.78□□□□□ -1.64
AP3S1Q92572 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.78□□□□□ -1.64
AP3S1Q92572 DUTP7-201ENST00000507982 486 ntBASIC4.78□□□□□ -1.64
AP3S1Q92572 HMGB3P16-201ENST00000508037 287 ntBASIC4.78□□□□□ -1.64
AP3S1Q92572 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.78□□□□□ -1.64
AP3S1Q92572 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.78□□□□□ -1.64
AP3S1Q92572 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.78□□□□□ -1.64
AP3S1Q92572 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP3S1Q92572 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.78□□□□□ -1.64
AP3S1Q92572 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.78□□□□□ -1.64
AP3S1Q92572 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.78□□□□□ -1.64
AP3S1Q92572 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.78□□□□□ -1.64
AP3S1Q92572 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.78□□□□□ -1.64
AP3S1Q92572 AL390877.1-201ENST00000605704 214 ntBASIC4.78□□□□□ -1.64
AP3S1Q92572 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms