Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AL390318.1-201ENST00000624564 687 ntBASIC5.86□□□□□ -1.47
TRAF3IP1Q8TDR0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.86□□□□□ -1.47
TRAF3IP1Q8TDR0 PWAR1-201ENST00000624188 2414 ntBASIC5.86□□□□□ -1.47
TRAF3IP1Q8TDR0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRAF3IP1Q8TDR0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 MTHFD2P5-201ENST00000320415 844 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 RNU1-150P-201ENST00000362491 162 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 RN7SKP185-201ENST00000362813 326 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 VN1R12P-201ENST00000403778 876 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AL158827.1-201ENST00000416300 391 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AL022331.1-201ENST00000429025 477 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 RN7SL197P-201ENST00000466981 299 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 RPS17P15-201ENST00000475609 349 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 RPL37P23-201ENST00000492641 294 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 RNA5SP473-201ENST00000516402 125 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 TOMM20P1-201ENST00000534518 427 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AC007342.5-201ENST00000571340 2142 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AC010487.1-201ENST00000594408 1172 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 AC067773.1-201ENST00000603284 1094 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 MIR6071-201ENST00000616741 78 ntBASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRAF3IP1Q8TDR0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AC112198.2-201ENST00000426589 6996 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 RMRPP5-201ENST00000411156 267 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AC066692.1-201ENST00000421721 457 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AC115283.1-201ENST00000427353 400 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 HMGB3P24-201ENST00000433260 622 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 NANOGP9-201ENST00000439890 892 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 LINC02210-201ENST00000444561 288 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 RPS23P9-201ENST00000448848 438 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 HLA-DPA3-207ENST00000454398 229 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 PSAT1P4-201ENST00000466500 526 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 RPSAP37-201ENST00000470913 821 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 RPS17P5-201ENST00000498293 408 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AC022784.5-201ENST00000522241 437 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AC122688.1-201ENST00000541494 223 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 MIR4311-201ENST00000580794 100 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AL138895.2-201ENST00000603019 178 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 FO681491.1-202ENST00000623392 737 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AC087565.3-203ENST00000641018 837 ntBASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.84□□□□□ -1.47
TRAF3IP1Q8TDR0 AC068870.1-201ENST00000563737 2455 ntBASIC5.84□□□□□ -1.48
TRAF3IP1Q8TDR0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.84□□□□□ -1.48
TRAF3IP1Q8TDR0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TRAF3IP1Q8TDR0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.84□□□□□ -1.48
TRAF3IP1Q8TDR0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRAF3IP1Q8TDR0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
TRAF3IP1Q8TDR0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRAF3IP1Q8TDR0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRAF3IP1Q8TDR0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
TRAF3IP1Q8TDR0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms