Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 SNORD56.6-201ENST00000384569 71 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 PPIAP9-201ENST00000403866 498 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 TUBB4BP6-201ENST00000437576 479 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 PPIAP7-201ENST00000454070 489 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC018638.3-201ENST00000461273 132 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC021660.1-201ENST00000465006 554 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 RN7SL570P-201ENST00000484405 292 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AP000620.1-201ENST00000527147 504 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC040958.1-201ENST00000561102 201 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC096996.1-201ENST00000563813 325 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 MTCYBP13-201ENST00000578634 1093 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC090607.5-201ENST00000615692 224 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC008691.1-209ENST00000642094 814 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 AC100757.1-201ENST00000616872 1835 ntBASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC112Q8NEF3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AL731532.2-201ENST00000623542 1953 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AC007618.1-201ENST00000366455 732 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AL357752.1-201ENST00000412817 349 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 GAPDHP48-201ENST00000436626 961 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AC023141.3-201ENST00000436698 278 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 DNAJA1P5-201ENST00000440278 943 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AL596266.1-201ENST00000448132 400 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 RBBP4P1-201ENST00000502424 1276 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AC139365.2-201ENST00000517972 253 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AC092709.1-201ENST00000521355 1045 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AC016839.1-201ENST00000578162 867 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 H3F3BP2-201ENST00000583907 357 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AC073333.2-201ENST00000603589 769 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 BNIP3P41-202ENST00000616656 861 ntBASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC112Q8NEF3 LYARP1-201ENST00000436977 1501 ntBASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 HMGN1P20-201ENST00000411849 300 ntBASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 GAPDHP75-201ENST00000433910 943 ntBASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 PNKDP1-201ENST00000435914 430 ntBASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 AC090804.1-201ENST00000448870 490 ntBASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 PRPF38AP1-201ENST00000451976 933 ntBASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC112Q8NEF3 AC098847.1-201ENST00000473094 348 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms