Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL445665.1-202ENST00000452436 324 ntBASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 VDAC2P4-201ENST00000452925 711 ntBASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 AP000547.1-201ENST00000454360 617 ntBASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 AC134669.1-201ENST00000581275 672 ntBASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 AL499605.1-201ENST00000604628 403 ntBASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 AC008691.1-209ENST00000642094 814 ntBASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDKL3Q8IVW4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 AC100757.1-201ENST00000616872 1835 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 AP005432.1-201ENST00000580891 3485 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 MIR133A2-201ENST00000347538 102 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 HMGN1P20-201ENST00000411849 300 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 OR6D1P-201ENST00000436165 939 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 RNU6-964P-201ENST00000516524 69 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 SNORA43.3-201ENST00000517240 103 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 AC020937.1-201ENST00000519677 1013 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 MRPS21P7-201ENST00000566937 238 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 AL022394.1-201ENST00000606979 292 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 Z95327.3-201ENST00000610385 572 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 MIR193BHG-214ENST00000641765 509 ntBASIC5.65□□□□□ -1.5
CDKL3Q8IVW4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 AC114786.1-201ENST00000512892 1415 ntBASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDKL3Q8IVW4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 YES1P1-201ENST00000418510 1628 ntBASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 CBX1P2-201ENST00000453841 458 ntBASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 UBFD1P1-201ENST00000473259 814 ntBASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AC109481.1-201ENST00000509173 282 ntBASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 RN7SKP70-201ENST00000516655 271 ntBASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 CYCSP22-201ENST00000517555 339 ntBASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.64□□□□□ -1.51
CDKL3Q8IVW4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms