Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL663074.2-201ENST00000440621 479 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC092601.1-201ENST00000444526 383 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AL590004.3-202ENST00000445883 451 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC002553.3-201ENST00000453002 341 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 CLIC4P1-201ENST00000453177 535 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC104164.1-201ENST00000460282 590 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 RN7SL205P-201ENST00000490174 284 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC111000.6-201ENST00000514471 709 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 MIR2117-201ENST00000516780 80 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 RNU6-334P-201ENST00000517072 102 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC130365.2-201ENST00000525882 1201 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 OR8Q1P-201ENST00000526467 655 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 NPIPB14P-203ENST00000532298 987 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC005726.4-201ENST00000582858 458 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AP005136.2-201ENST00000583253 1049 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 AL096803.3-201ENST00000609032 532 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 MIR1264-201ENST00000616374 69 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 RMST_5.1-201ENST00000618704 126 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.29□□□□□ -1.56
SHFQ7M4L6 AC010325.3-201ENST00000641084 394 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHFQ7M4L6 AL356317.1-201ENST00000396110 1436 ntBASIC5.29□□□□□ -1.56
SHFQ7M4L6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHFQ7M4L6 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHFQ7M4L6 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHFQ7M4L6 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHFQ7M4L6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHFQ7M4L6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHFQ7M4L6 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHFQ7M4L6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHFQ7M4L6 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHFQ7M4L6 SNORA72.3-201ENST00000365074 132 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 RNA5SP187-201ENST00000384400 119 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 SNRPEP6-201ENST00000407465 277 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 CDY17P-201ENST00000414121 1282 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 MTND4P11-201ENST00000417020 1058 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 VN1R20P-201ENST00000425215 966 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 CDY8P-201ENST00000428380 1279 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 RPL12P18-201ENST00000437175 325 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 CDY20P-201ENST00000447528 1279 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 MTATP6P14-201ENST00000455189 673 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 RPS7P10-201ENST00000464254 603 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 H3F3AP5-201ENST00000475267 429 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 RPL12P30-201ENST00000488389 499 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 TPT1P8-201ENST00000510120 555 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 AC036111.2-201ENST00000533247 901 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 UBTFL9-201ENST00000534504 1148 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 AC093014.1-201ENST00000548926 724 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 HMGN1P26-201ENST00000558737 303 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 AC023158.1-201ENST00000561632 1025 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHFQ7M4L6 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 AC012368.3-201ENST00000604190 219 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 AL445670.1-201ENST00000618889 801 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 AC138965.3-201ENST00000623875 498 ntBASIC5.28□□□□□ -1.56
SHFQ7M4L6 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHFQ7M4L6 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHFQ7M4L6 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SHFQ7M4L6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHFQ7M4L6 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHFQ7M4L6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHFQ7M4L6 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SHFQ7M4L6 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms