Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC069277.2-201ENST00000454211 432 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 HSPE1P22-201ENST00000456856 327 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC068228.1-201ENST00000461723 211 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 RPS17P15-201ENST00000475609 349 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC006539.1-201ENST00000481419 501 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 PDCL3P4-201ENST00000489621 720 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC108157.1-201ENST00000510511 539 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 RNU6-760P-201ENST00000516078 97 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 SCARNA18.1-201ENST00000516330 83 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC022826.1-201ENST00000519383 805 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AP000619.2-201ENST00000546014 969 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC087888.1-201ENST00000550884 1254 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 GARSP1-201ENST00000570895 719 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 MIR4776-2-201ENST00000580204 80 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 MIR7109-201ENST00000613748 65 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC020763.5-201ENST00000623298 430 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC099654.6-201ENST00000636487 512 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 IFIT1P1-201ENST00000400497 1449 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC093775.1-201ENST00000624154 1868 ntBASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.22□□□□□ -1.57
NHLRC1Q6VVB1 AC114774.1-201ENST00000507410 1770 ntBASIC5.21□□□□□ -1.57
NHLRC1Q6VVB1 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.57
NHLRC1Q6VVB1 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
NHLRC1Q6VVB1 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NHLRC1Q6VVB1 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
NHLRC1Q6VVB1 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 RN7SKP275-201ENST00000364626 301 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AL034403.1-201ENST00000399414 885 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 VN1R12P-201ENST00000403778 876 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 SNORA11.3-201ENST00000408471 128 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 NENFP1-201ENST00000419476 466 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC110602.1-201ENST00000437414 318 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AL138899.2-201ENST00000439139 499 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 CYCSP51-201ENST00000443545 318 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 EIF2S2P4-201ENST00000461070 984 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC021205.1-201ENST00000468797 348 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC098847.1-201ENST00000473094 348 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC025181.1-201ENST00000477507 416 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 RNA5SP438-201ENST00000516561 112 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC011853.1-201ENST00000518911 454 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC027369.2-201ENST00000528030 440 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC002310.3-201ENST00000569728 723 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 SNX6P1-201ENST00000601728 1224 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 SNORA11.6-201ENST00000619030 128 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC073593.1-201ENST00000624500 411 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 AC110792.3-201ENST00000595906 1614 ntBASIC5.21□□□□□ -1.58
NHLRC1Q6VVB1 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms