Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 MTCO1P22-201ENST00000604619 1360 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 AL049634.1-201ENST00000453770 1720 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 UGT2B24P-201ENST00000514441 1597 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 OOSP1-201ENST00000398992 1270 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 OR7E156P-201ENST00000400303 464 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 SNORA11.5-201ENST00000408163 128 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 NDUFA5P1-201ENST00000433858 341 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 Z80107.1-201ENST00000436830 412 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 RN7SL570P-201ENST00000484405 292 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 AC074255.1-201ENST00000511259 501 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 RNU4-18P-201ENST00000516751 149 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 SCARNA6.1-201ENST00000516989 238 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 AC021678.3-201ENST00000517893 476 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 TRIM77BP-201ENST00000524985 1119 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 OR10D4P-201ENST00000525892 951 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 AC040174.2-201ENST00000602701 465 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 FAM27E4-201ENST00000605259 342 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.65□□□□□ -1.5
ZNF549Q6P9A3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
ZNF549Q6P9A3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ZNF549Q6P9A3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.65□□□□□ -1.51
ZNF549Q6P9A3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
ZNF549Q6P9A3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
ZNF549Q6P9A3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.65□□□□□ -1.51
ZNF549Q6P9A3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
ZNF549Q6P9A3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ZNF549Q6P9A3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ZNF549Q6P9A3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
ZNF549Q6P9A3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.65□□□□□ -1.51
ZNF549Q6P9A3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
ZNF549Q6P9A3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 RNA5SP453-201ENST00000362503 119 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 RNA5SP433-201ENST00000364491 114 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC007618.1-201ENST00000366455 732 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC005042.1-201ENST00000393397 800 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AL607077.1-201ENST00000401718 499 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AL691517.1-201ENST00000440833 1235 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 MTCYBP11-201ENST00000447254 1109 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 MEMO1P4-201ENST00000453590 386 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 RPS23P2-201ENST00000463671 415 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC117394.1-201ENST00000477323 567 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC092902.1-201ENST00000486999 259 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 OR7E157P-201ENST00000494376 911 ntBASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZNF549Q6P9A3 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms