Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.2□□□□□ -1.26
RNF43Q68DV7 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.2□□□□□ -1.26
RNF43Q68DV7 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
RNF43Q68DV7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC7.2□□□□□ -1.26
RNF43Q68DV7 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF43Q68DV7 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF43Q68DV7 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.2□□□□□ -1.26
RNF43Q68DV7 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.2□□□□□ -1.26
RNF43Q68DV7 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF43Q68DV7 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF43Q68DV7 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RNF43Q68DV7 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF43Q68DV7 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.2□□□□□ -1.26
RNF43Q68DV7 CLCA3P-203ENST00000490028 2781 ntBASIC7.2□□□□□ -1.26
RNF43Q68DV7 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AL121949.2-201ENST00000403446 1548 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 SNORD116.1-201ENST00000365628 92 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 VDAC2P1-201ENST00000399358 958 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 AL031577.2-201ENST00000404133 280 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 BTF3P7-201ENST00000407097 488 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AC007365.2-201ENST00000428806 458 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 HMGB3P6-201ENST00000444896 598 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 AC093392.2-201ENST00000450682 337 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 PSMA6P2-201ENST00000457574 686 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 UBDP1-202ENST00000457888 382 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 RPL34P34-201ENST00000465389 354 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 RPL30P6-201ENST00000475925 342 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 AC026826.1-201ENST00000493002 361 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 ARL4AP1-201ENST00000503220 705 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AC074344.1-201ENST00000512823 224 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 OR7E154P-201ENST00000525174 932 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 NMNAT1P5-201ENST00000559657 841 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AC027281.1-201ENST00000574178 758 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 MIR4301-201ENST00000577203 66 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AL583832.1-201ENST00000603227 784 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AL390877.1-201ENST00000605704 214 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 AC073862.4-201ENST00000622982 854 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 ATP5BP1-201ENST00000411980 1574 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 FO082842.1-201ENST00000423552 1370 ntBASIC7.19□□□□□ -1.26
RNF43Q68DV7 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF43Q68DV7 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
RNF43Q68DV7 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 ZNF680P1-201ENST00000436625 1469 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 AL391261.1-201ENST00000555712 1479 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 API5P1-201ENST00000424316 1510 ntBASIC7.18□□□□□ -1.26
RNF43Q68DV7 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF43Q68DV7 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.18□□□□□ -1.26
RNF43Q68DV7 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms