Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SNORD116-7-201ENST00000384404 95 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 SNORD116-5-201ENST00000384462 95 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 MIR142-201ENST00000384835 87 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AL391419.1-201ENST00000398901 1275 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 DNAJC19P6-201ENST00000401853 280 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 RPL12P23-201ENST00000405880 490 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AC017035.1-201ENST00000411999 1115 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 GPN3P1-201ENST00000423883 535 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AC097721.1-201ENST00000427150 1253 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 AL390023.1-201ENST00000428836 262 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 MOB1AP1-201ENST00000430903 535 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC090018.1-201ENST00000434369 367 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 EMC3-AS1-205ENST00000438698 534 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.74□□□□□ -1.49
CLRN1P58418 HMGN1P32-201ENST00000441744 256 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 FGF7P5-201ENST00000441829 291 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.74□□□□□ -1.49
CLRN1P58418 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 RPL31P11-202ENST00000454082 372 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 RN7SL790P-201ENST00000474043 298 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 RPL9P15-201ENST00000491096 532 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 FTH1P8-201ENST00000498161 514 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC093870.1-201ENST00000506837 213 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 BTG4P1-201ENST00000510421 183 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC119751.1-201ENST00000513357 765 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.74□□□□□ -1.49
CLRN1P58418 AP005639.1-201ENST00000526939 192 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.74□□□□□ -1.49
CLRN1P58418 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC009729.1-201ENST00000548873 1133 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 AC008015.1-201ENST00000555505 465 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 DPPA3P2-202ENST00000557188 1219 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC233702.7-202ENST00000582941 211 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 AL021707.7-201ENST00000607991 416 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AC013468.1-201ENST00000608680 598 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 MIR6849-201ENST00000618543 69 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AC026585.1-201ENST00000619582 524 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 AC092608.3-201ENST00000625017 386 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 AC103706.2-201ENST00000638080 240 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CLRN1P58418 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.74□□□□□ -1.49
CLRN1P58418 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 AL078595.2-201ENST00000605309 1780 ntBASIC5.74□□□□□ -1.49
CLRN1P58418 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CLRN1P58418 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
CLRN1P58418 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.74□□□□□ -1.49
CLRN1P58418 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLRN1P58418 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CLRN1P58418 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 AC112255.1-201ENST00000624070 2493 ntBASIC5.73□□□□□ -1.49
CLRN1P58418 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
CLRN1P58418 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLRN1P58418 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLRN1P58418 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.73□□□□□ -1.49
CLRN1P58418 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.73□□□□□ -1.49
CLRN1P58418 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms