Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CLDN6P56747 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN6P56747 AC087516.1-201ENST00000561236 2428 ntBASIC5.42□□□□□ -1.54
CLDN6P56747 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN6P56747 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN6P56747 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 THAP12P9-201ENST00000503971 2360 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.41□□□□□ -1.54
CLDN6P56747 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 GAPDHP42-201ENST00000406848 981 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN6P56747 AL139128.1-201ENST00000413921 941 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN6P56747 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.41□□□□□ -1.54
CLDN6P56747 BX679664.2-201ENST00000439282 283 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 AC015983.1-201ENST00000441577 373 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN6P56747 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 AL162739.1-201ENST00000450606 307 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN6P56747 RN7SL570P-201ENST00000484405 292 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 DUTP1-201ENST00000493631 470 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.41□□□□□ -1.54
CLDN6P56747 RN7SKP66-201ENST00000516681 231 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.41□□□□□ -1.54
CLDN6P56747 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN6P56747 RBM22P1-201ENST00000578589 1214 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 AC012616.1-201ENST00000600294 197 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN6P56747 SAMMSON-209ENST00000641222 1100 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 OR4G1P-202ENST00000641173 1788 ntBASIC5.41□□□□□ -1.54
CLDN6P56747 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN6P56747 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN6P56747 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN6P56747 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN6P56747 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN6P56747 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN6P56747 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN6P56747 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CLDN6P56747 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN6P56747 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN6P56747 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN6P56747 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN6P56747 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN6P56747 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN6P56747 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN6P56747 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN6P56747 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN6P56747 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLDN6P56747 AC005294.1-201ENST00000355509 281 ntBASIC5.4□□□□□ -1.54
CLDN6P56747 RNU1-43P-201ENST00000365052 165 ntBASIC5.4□□□□□ -1.54
CLDN6P56747 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN6P56747 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN6P56747 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN6P56747 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN6P56747 HMGB1P32-201ENST00000425971 565 ntBASIC5.4□□□□□ -1.54
CLDN6P56747 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.4□□□□□ -1.54
CLDN6P56747 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN6P56747 CYP4F27P-201ENST00000514557 494 ntBASIC5.4□□□□□ -1.54
CLDN6P56747 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN6P56747 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN6P56747 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN6P56747 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN6P56747 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN6P56747 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
CLDN6P56747 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.4□□□□□ -1.54
CLDN6P56747 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN6P56747 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CLDN6P56747 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN6P56747 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN6P56747 AL049539.1-201ENST00000611964 459 ntBASIC5.4□□□□□ -1.54
CLDN6P56747 AL445528.2-201ENST00000620582 470 ntBASIC5.4□□□□□ -1.54
CLDN6P56747 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.4□□□□□ -1.55
CLDN6P56747 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN6P56747 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CLDN6P56747 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN6P56747 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN6P56747 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN6P56747 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CLDN6P56747 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CLDN6P56747 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.4□□□□□ -1.55
CLDN6P56747 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
CLDN6P56747 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLDN6P56747 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN6P56747 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN6P56747 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms