Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
GFRA1P56159 BX322650.1-201ENST00000332359 2143 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.2□□□□□ -1.42
GFRA1P56159 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
GFRA1P56159 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.2□□□□□ -1.42
GFRA1P56159 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
GFRA1P56159 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
GFRA1P56159 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 SNORA62.2-201ENST00000364672 152 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
GFRA1P56159 RPL9P21-201ENST00000392269 505 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.2□□□□□ -1.42
GFRA1P56159 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.2□□□□□ -1.42
GFRA1P56159 RPS15AP38-201ENST00000413110 372 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.2□□□□□ -1.42
GFRA1P56159 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.2□□□□□ -1.42
GFRA1P56159 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.2□□□□□ -1.42
GFRA1P56159 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.2□□□□□ -1.42
GFRA1P56159 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.2□□□□□ -1.42
GFRA1P56159 AHCYP8-201ENST00000425108 209 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.2□□□□□ -1.42
GFRA1P56159 MED14P1-201ENST00000430517 648 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.2□□□□□ -1.42
GFRA1P56159 MTCYBP39-201ENST00000437562 491 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 E2F6P3-201ENST00000441743 743 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.2□□□□□ -1.42
GFRA1P56159 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.2□□□□□ -1.42
GFRA1P56159 CEACAMP11-201ENST00000455211 583 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 BX248409.1-201ENST00000455497 255 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 RPS4XP17-201ENST00000479057 754 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 RN7SL654P-201ENST00000479178 292 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.2□□□□□ -1.42
GFRA1P56159 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 CR383658.1-201ENST00000514609 734 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AC093878.1-201ENST00000515630 432 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 RNU6-416P-201ENST00000516265 103 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.2□□□□□ -1.42
GFRA1P56159 AC087752.2-201ENST00000521219 281 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.2□□□□□ -1.42
GFRA1P56159 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
GFRA1P56159 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.2□□□□□ -1.42
GFRA1P56159 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.2□□□□□ -1.42
GFRA1P56159 AP000873.5-201ENST00000533906 236 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.2□□□□□ -1.42
GFRA1P56159 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
GFRA1P56159 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.2□□□□□ -1.42
GFRA1P56159 HMGN1P26-201ENST00000558737 303 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 RN7SL366P-201ENST00000577957 292 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 MTATP6P3-201ENST00000581686 676 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.2□□□□□ -1.42
GFRA1P56159 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.2□□□□□ -1.42
GFRA1P56159 AC103881.1-201ENST00000603476 538 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 BUB1P1-201ENST00000603541 607 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 RPS4XP21-201ENST00000603814 750 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AL035410.2-201ENST00000604963 864 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AC018714.1-201ENST00000605028 208 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AL021997.1-201ENST00000605757 193 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AC004908.1-201ENST00000606572 541 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AL135786.2-201ENST00000608422 615 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.2□□□□□ -1.42
GFRA1P56159 AL356274.1-201ENST00000617064 410 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AL136981.2-201ENST00000617319 734 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
GFRA1P56159 CLUHP10-201ENST00000631979 980 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AC063952.1-203ENST00000634410 658 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AC183089.2-201ENST00000637931 916 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 CASC19-212ENST00000641153 1287 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
GFRA1P56159 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 DLEU2L-201ENST00000371086 3555 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 HSPD1P9-201ENST00000420325 1636 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.2□□□□□ -1.42
GFRA1P56159 AL391262.1-201ENST00000556558 1992 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
GFRA1P56159 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.2□□□□□ -1.42
GFRA1P56159 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 CASC19-260ENST00000641828 2001 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 AL353743.4-201ENST00000422653 1547 ntBASIC6.2□□□□□ -1.42
GFRA1P56159 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GFRA1P56159 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
GFRA1P56159 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
GFRA1P56159 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms