Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH6P55285 LINC02019-201ENST00000608605 2060 ntBASIC5.73□□□□□ -1.49
CDH6P55285 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH6P55285 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CDH6P55285 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH6P55285 BRAFP1-201ENST00000445336 2703 ntBASIC5.73□□□□□ -1.49
CDH6P55285 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH6P55285 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.73□□□□□ -1.49
CDH6P55285 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH6P55285 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CDH6P55285 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH6P55285 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDH6P55285 SNORD56.6-201ENST00000384569 71 ntBASIC5.73□□□□□ -1.49
CDH6P55285 MIR551A-201ENST00000385042 96 ntBASIC5.73□□□□□ -1.49
CDH6P55285 GAPDHP42-201ENST00000406848 981 ntBASIC5.73□□□□□ -1.49
CDH6P55285 SDHDP6-201ENST00000414693 480 ntBASIC5.73□□□□□ -1.49
CDH6P55285 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH6P55285 AL133173.1-201ENST00000423458 397 ntBASIC5.73□□□□□ -1.49
CDH6P55285 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH6P55285 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH6P55285 AC079807.1-201ENST00000429993 481 ntBASIC5.73□□□□□ -1.49
CDH6P55285 NPM1P18-201ENST00000434232 732 ntBASIC5.73□□□□□ -1.49
CDH6P55285 AC013410.1-201ENST00000436223 1232 ntBASIC5.73□□□□□ -1.49
CDH6P55285 Z84478.1-201ENST00000438230 1219 ntBASIC5.73□□□□□ -1.49
CDH6P55285 SUMO2P3-201ENST00000438311 288 ntBASIC5.73□□□□□ -1.49
CDH6P55285 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH6P55285 AC021106.1-201ENST00000509020 1058 ntBASIC5.73□□□□□ -1.49
CDH6P55285 AC079064.1-201ENST00000528365 362 ntBASIC5.73□□□□□ -1.49
CDH6P55285 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH6P55285 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDH6P55285 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH6P55285 AC105036.1-201ENST00000566222 271 ntBASIC5.73□□□□□ -1.49
CDH6P55285 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH6P55285 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH6P55285 AC010547.6-201ENST00000571789 193 ntBASIC5.73□□□□□ -1.49
CDH6P55285 AP005403.1-201ENST00000579720 229 ntBASIC5.73□□□□□ -1.49
CDH6P55285 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH6P55285 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH6P55285 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.73□□□□□ -1.49
CDH6P55285 AC009237.13-201ENST00000603193 276 ntBASIC5.73□□□□□ -1.49
CDH6P55285 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH6P55285 PPATP2-201ENST00000605635 508 ntBASIC5.73□□□□□ -1.49
CDH6P55285 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH6P55285 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH6P55285 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH6P55285 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH6P55285 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH6P55285 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH6P55285 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH6P55285 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH6P55285 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.73□□□□□ -1.49
CDH6P55285 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CDH6P55285 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDH6P55285 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH6P55285 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDH6P55285 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 RN7SKP15-201ENST00000364742 309 ntBASIC5.72□□□□□ -1.49
CDH6P55285 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDH6P55285 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDH6P55285 BMS1P17-202ENST00000416720 316 ntBASIC5.72□□□□□ -1.49
CDH6P55285 VN1R3-201ENST00000418822 919 ntBASIC5.72□□□□□ -1.49
CDH6P55285 AC009784.1-201ENST00000426484 460 ntBASIC5.72□□□□□ -1.49
CDH6P55285 RPS29P14-201ENST00000431518 171 ntBASIC5.72□□□□□ -1.49
CDH6P55285 OR6D1P-201ENST00000436165 939 ntBASIC5.72□□□□□ -1.49
CDH6P55285 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH6P55285 AL450023.1-201ENST00000450868 751 ntBASIC5.72□□□□□ -1.49
CDH6P55285 AC144530.1-201ENST00000452862 555 ntBASIC5.72□□□□□ -1.49
CDH6P55285 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH6P55285 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH6P55285 AC091912.1-201ENST00000511351 248 ntBASIC5.72□□□□□ -1.49
CDH6P55285 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH6P55285 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.72□□□□□ -1.49
CDH6P55285 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH6P55285 NPM1P5-201ENST00000557228 838 ntBASIC5.72□□□□□ -1.49
CDH6P55285 RBM22P12-201ENST00000567098 1255 ntBASIC5.72□□□□□ -1.49
CDH6P55285 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH6P55285 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH6P55285 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH6P55285 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH6P55285 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH6P55285 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH6P55285 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH6P55285 AC008115.3-201ENST00000614874 549 ntBASIC5.72□□□□□ -1.49
CDH6P55285 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 AP001962.1-201ENST00000624114 559 ntBASIC5.72□□□□□ -1.49
CDH6P55285 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH6P55285 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.72□□□□□ -1.49
CDH6P55285 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CDH6P55285 AC020633.1-201ENST00000468439 2247 ntBASIC5.72□□□□□ -1.49
CDH6P55285 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CDH6P55285 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CDH6P55285 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms