Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAD23BP54727 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAD23BP54727 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAD23BP54727 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RAD23BP54727 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
RAD23BP54727 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAD23BP54727 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.04□□□□□ -1.44
RAD23BP54727 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.04□□□□□ -1.44
RAD23BP54727 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RAD23BP54727 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RAD23BP54727 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RAD23BP54727 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RAD23BP54727 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAD23BP54727 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAD23BP54727 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RAD23BP54727 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RAD23BP54727 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
RAD23BP54727 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.03□□□□□ -1.44
RAD23BP54727 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.03□□□□□ -1.44
RAD23BP54727 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
RAD23BP54727 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.03□□□□□ -1.44
RAD23BP54727 TET1P1-201ENST00000426627 2301 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 PWAR1-201ENST00000624188 2414 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RAD23BP54727 RNA5SP131-201ENST00000365452 119 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 AL031985.1-201ENST00000392713 418 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 RANP7-201ENST00000418085 644 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.03□□□□□ -1.44
RAD23BP54727 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.03□□□□□ -1.44
RAD23BP54727 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RAD23BP54727 AC005297.1-201ENST00000444765 862 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 RPL36AP39-201ENST00000445859 318 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.03□□□□□ -1.44
RAD23BP54727 SNORA70.11-201ENST00000515987 138 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 SNORA70.13-201ENST00000516116 138 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.03□□□□□ -1.44
RAD23BP54727 OR5D2P-201ENST00000524390 911 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 AC130364.2-201ENST00000528639 604 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.03□□□□□ -1.44
RAD23BP54727 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.03□□□□□ -1.44
RAD23BP54727 AC008521.2-201ENST00000591021 259 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.03□□□□□ -1.44
RAD23BP54727 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.03□□□□□ -1.44
RAD23BP54727 AP005131.7-201ENST00000610087 611 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.03□□□□□ -1.44
RAD23BP54727 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RAD23BP54727 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.03□□□□□ -1.44
RAD23BP54727 HPVC1-201ENST00000629899 1198 ntBASIC6.03□□□□□ -1.44
RAD23BP54727 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.03□□□□□ -1.44
RAD23BP54727 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RAD23BP54727 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.03□□□□□ -1.44
RAD23BP54727 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RAD23BP54727 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RAD23BP54727 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RAD23BP54727 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
RAD23BP54727 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAD23BP54727 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAD23BP54727 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAD23BP54727 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAD23BP54727 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAD23BP54727 GAPDHP24-201ENST00000328713 983 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 RNA5SP326-201ENST00000363209 110 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 RN7SKP81-201ENST00000365603 331 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 AC005042.1-201ENST00000393397 800 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 RMRPP5-201ENST00000411156 267 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 USP9YP19-201ENST00000412165 485 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 CDY17P-201ENST00000414121 1282 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.02□□□□□ -1.45
RAD23BP54727 RPL34P3-201ENST00000421454 338 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.02□□□□□ -1.45
RAD23BP54727 AC064862.4-201ENST00000442180 334 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.02□□□□□ -1.45
RAD23BP54727 AC087672.1-201ENST00000479876 766 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 NPM1P28-201ENST00000492269 840 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.02□□□□□ -1.45
RAD23BP54727 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.02□□□□□ -1.45
RAD23BP54727 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.02□□□□□ -1.45
RAD23BP54727 AC245128.3-201ENST00000594721 748 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 AL583832.1-201ENST00000603227 784 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 AC005229.3-201ENST00000603438 323 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 KATNBL1P1-201ENST00000605192 748 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.02□□□□□ -1.45
RAD23BP54727 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.02□□□□□ -1.45
RAD23BP54727 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.02□□□□□ -1.45
RAD23BP54727 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.02□□□□□ -1.45
RAD23BP54727 AC020923.1-201ENST00000624021 917 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.02□□□□□ -1.45
RAD23BP54727 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RAD23BP54727 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAD23BP54727 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
RAD23BP54727 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
RAD23BP54727 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.02□□□□□ -1.45
RAD23BP54727 BRAFP1-201ENST00000445336 2703 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAD23BP54727 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RAD23BP54727 AC239868.2-201ENST00000564237 4527 ntBASIC6.02□□□□□ -1.45
RAD23BP54727 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RAD23BP54727 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
RAD23BP54727 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms