Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AL161756.3-201ENST00000641216 2071 ntBASIC5.7□□□□□ -1.5
CLCNKAP51800 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.7□□□□□ -1.5
CLCNKAP51800 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.7□□□□□ -1.5
CLCNKAP51800 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CLCNKAP51800 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CLCNKAP51800 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
CLCNKAP51800 MFSD8-219ENST00000641228 2559 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CLCNKAP51800 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLCNKAP51800 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLCNKAP51800 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLCNKAP51800 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLCNKAP51800 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLCNKAP51800 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CLCNKAP51800 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.69□□□□□ -1.5
CLCNKAP51800 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLCNKAP51800 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AL589994.1-201ENST00000404962 340 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 RN7SKP293-201ENST00000411389 296 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.69□□□□□ -1.5
CLCNKAP51800 NAP1L4P2-201ENST00000425958 899 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 AC127526.2-201ENST00000426436 775 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 BX119321.1-201ENST00000428912 797 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.69□□□□□ -1.5
CLCNKAP51800 FTLP19-201ENST00000433300 394 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 AP000949.1-201ENST00000438328 629 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 AC015983.1-201ENST00000441577 373 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.69□□□□□ -1.5
CLCNKAP51800 HMGN1P36-201ENST00000446623 298 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 OR52Y1P-201ENST00000452418 828 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 FRG2FP-204ENST00000453982 852 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AC022215.1-201ENST00000481770 362 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.69□□□□□ -1.5
CLCNKAP51800 TOMM22P4-201ENST00000511318 336 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 OR8K2P-201ENST00000524645 927 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 AC090424.1-201ENST00000535243 736 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 IGBP1P1-201ENST00000554337 1009 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.69□□□□□ -1.5
CLCNKAP51800 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AC012146.2-201ENST00000576545 416 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AC015802.2-201ENST00000589690 189 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.69□□□□□ -1.5
CLCNKAP51800 RNA5SP440-201ENST00000612665 119 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 AC126175.1-201ENST00000617041 758 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 AC080188.3-201ENST00000624842 748 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AC073869.7-201ENST00000640874 297 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLCNKAP51800 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLCNKAP51800 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.69□□□□□ -1.5
CLCNKAP51800 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CLCNKAP51800 AC117409.1-201ENST00000470499 1310 ntBASIC5.69□□□□□ -1.5
CLCNKAP51800 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.69□□□□□ -1.5
CLCNKAP51800 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLCNKAP51800 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLCNKAP51800 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLCNKAP51800 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLCNKAP51800 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CLCNKAP51800 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CLCNKAP51800 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLCNKAP51800 AC005224.3-201ENST00000584683 2140 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CLCNKAP51800 TMSB4XP4-201ENST00000323496 618 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CLCNKAP51800 RN7SKP81-201ENST00000365603 331 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.68□□□□□ -1.5
CLCNKAP51800 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CLCNKAP51800 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCNKAP51800 U3.23-201ENST00000391132 200 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 RNA5SP178-201ENST00000410380 128 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 BMS1P17-202ENST00000416720 316 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 AL034379.1-201ENST00000423216 253 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.68□□□□□ -1.5
CLCNKAP51800 AL390879.2-203ENST00000426943 1121 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 AL590623.1-201ENST00000427864 105 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 RPS3AP38-201ENST00000435889 763 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 MTND4P15-201ENST00000437913 1033 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 AC064862.4-201ENST00000442180 334 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCNKAP51800 AC073072.2-201ENST00000447425 348 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCNKAP51800 OSTCP1-201ENST00000455507 450 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 CYCSP53-201ENST00000455540 265 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLCNKAP51800 RN7SL570P-201ENST00000484405 292 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.68□□□□□ -1.5
CLCNKAP51800 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCNKAP51800 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.68□□□□□ -1.5
CLCNKAP51800 AC104997.1-201ENST00000519761 717 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms