Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
SMARCA4P51532 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC9.47□□□□□ -0.89
SMARCA4P51532 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC9.47□□□□□ -0.89
SMARCA4P51532 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 RN7SL188P-201ENST00000469842 285 ntBASIC9.47□□□□□ -0.89
SMARCA4P51532 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
SMARCA4P51532 IGKV1-32-201ENST00000519290 311 ntBASIC9.47□□□□□ -0.89
SMARCA4P51532 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC9.47□□□□□ -0.89
SMARCA4P51532 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 AP006289.1-201ENST00000538089 277 ntBASIC9.47□□□□□ -0.89
SMARCA4P51532 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
SMARCA4P51532 AC091042.1-201ENST00000579213 173 ntBASIC9.47□□□□□ -0.89
SMARCA4P51532 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC9.47□□□□□ -0.89
SMARCA4P51532 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC9.47□□□□□ -0.89
SMARCA4P51532 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA4P51532 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC9.46□□□□□ -0.89
SMARCA4P51532 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC9.46□□□□□ -0.89
SMARCA4P51532 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
SMARCA4P51532 FAM3C2-201ENST00000312214 681 ntBASIC9.46□□□□□ -0.89
SMARCA4P51532 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC9.46□□□□□ -0.89
SMARCA4P51532 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC9.46□□□□□ -0.89
SMARCA4P51532 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC9.46□□□□□ -0.89
SMARCA4P51532 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC9.46□□□□□ -0.89
SMARCA4P51532 BGLT3-201ENST00000564523 994 ntBASIC9.46□□□□□ -0.89
SMARCA4P51532 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC9.46□□□□□ -0.89
SMARCA4P51532 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SMARCA4P51532 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
SMARCA4P51532 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC9.46□□□□□ -0.9
SMARCA4P51532 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC9.46□□□□□ -0.9
SMARCA4P51532 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9.46□□□□□ -0.9
SMARCA4P51532 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
SMARCA4P51532 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SMARCA4P51532 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC9.46□□□□□ -0.9
SMARCA4P51532 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SMARCA4P51532 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC9.45□□□□□ -0.9
SMARCA4P51532 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC9.45□□□□□ -0.9
SMARCA4P51532 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC9.45□□□□□ -0.9
SMARCA4P51532 AC020898.1-201ENST00000474167 787 ntBASIC9.45□□□□□ -0.9
SMARCA4P51532 RN7SL481P-201ENST00000477764 299 ntBASIC9.45□□□□□ -0.9
SMARCA4P51532 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SMARCA4P51532 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC9.45□□□□□ -0.9
SMARCA4P51532 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SMARCA4P51532 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMARCA4P51532 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMARCA4P51532 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC9.45□□□□□ -0.9
SMARCA4P51532 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SMARCA4P51532 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SMARCA4P51532 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
SMARCA4P51532 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC9.45□□□□□ -0.9
SMARCA4P51532 COX6CP17-201ENST00000421389 185 ntBASIC9.45□□□□□ -0.9
SMARCA4P51532 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC9.45□□□□□ -0.9
SMARCA4P51532 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC9.45□□□□□ -0.9
SMARCA4P51532 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC9.45□□□□□ -0.9
SMARCA4P51532 AC112498.1-201ENST00000444401 332 ntBASIC9.45□□□□□ -0.9
SMARCA4P51532 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC9.45□□□□□ -0.9
SMARCA4P51532 ARL6IP1P3-201ENST00000524544 560 ntBASIC9.45□□□□□ -0.9
SMARCA4P51532 OR4A43P-201ENST00000532938 908 ntBASIC9.45□□□□□ -0.9
SMARCA4P51532 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC9.45□□□□□ -0.9
SMARCA4P51532 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SMARCA4P51532 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SMARCA4P51532 ALB-220ENST00000621628 1606 ntTSL 5 BASIC9.44□□□□□ -0.9
SMARCA4P51532 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC9.44□□□□□ -0.9
SMARCA4P51532 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC9.44□□□□□ -0.9
SMARCA4P51532 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMARCA4P51532 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC9.44□□□□□ -0.9
SMARCA4P51532 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SMARCA4P51532 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMARCA4P51532 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC9.44□□□□□ -0.9
SMARCA4P51532 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC9.44□□□□□ -0.9
SMARCA4P51532 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SMARCA4P51532 RNA5SP332-201ENST00000391063 115 ntBASIC9.44□□□□□ -0.9
SMARCA4P51532 P2RY10P2-201ENST00000416730 913 ntBASIC9.44□□□□□ -0.9
SMARCA4P51532 AC069213.2-201ENST00000420238 366 ntBASIC9.44□□□□□ -0.9
SMARCA4P51532 RN7SL354P-201ENST00000469282 294 ntBASIC9.44□□□□□ -0.9
SMARCA4P51532 HMGN2P25-201ENST00000486956 268 ntBASIC9.44□□□□□ -0.9
SMARCA4P51532 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC9.44□□□□□ -0.9
SMARCA4P51532 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SMARCA4P51532 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC9.44□□□□□ -0.9
SMARCA4P51532 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC9.44□□□□□ -0.9
SMARCA4P51532 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
SMARCA4P51532 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SMARCA4P51532 AL132640.2-201ENST00000559968 1698 ntBASIC9.44□□□□□ -0.9
SMARCA4P51532 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SMARCA4P51532 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC9.44□□□□□ -0.9
SMARCA4P51532 AC063976.2-201ENST00000425667 3556 ntBASIC9.44□□□□□ -0.9
SMARCA4P51532 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC9.44□□□□□ -0.9
SMARCA4P51532 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SMARCA4P51532 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SMARCA4P51532 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SMARCA4P51532 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms