Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 OR4A43P-201ENST00000532938 908 ntBASIC5.73□□□□□ -1.49
HTTP42858 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.73□□□□□ -1.49
HTTP42858 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.73□□□□□ -1.49
HTTP42858 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.73□□□□□ -1.49
HTTP42858 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 AL590065.1-201ENST00000603371 4774 ntBASIC5.73□□□□□ -1.49
HTTP42858 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HTTP42858 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
HTTP42858 NAIP-201ENST00000194097 6088 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HTTP42858 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.73□□□□□ -1.49
HTTP42858 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.73□□□□□ -1.49
HTTP42858 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
HTTP42858 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.73□□□□□ -1.49
HTTP42858 AC004232.3-201ENST00000622977 525 ntBASIC5.73□□□□□ -1.49
HTTP42858 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.73□□□□□ -1.49
HTTP42858 MAPK10-304ENST00000641341 3984 ntBASIC5.73□□□□□ -1.49
HTTP42858 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC5.73□□□□□ -1.49
HTTP42858 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HTTP42858 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.73□□□□□ -1.49
HTTP42858 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HTTP42858 RPL21P108-201ENST00000413857 481 ntBASIC5.72□□□□□ -1.49
HTTP42858 RPS27AP12-201ENST00000429552 465 ntBASIC5.72□□□□□ -1.49
HTTP42858 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.72□□□□□ -1.49
HTTP42858 AC010326.1-201ENST00000462726 602 ntBASIC5.72□□□□□ -1.49
HTTP42858 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.72□□□□□ -1.49
HTTP42858 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
HTTP42858 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.72□□□□□ -1.49
HTTP42858 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HTTP42858 ERG-204ENST00000398907 4809 ntTSL 5 BASIC5.72□□□□□ -1.49
HTTP42858 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HTTP42858 OR7E25P-202ENST00000641088 5937 ntBASIC5.72□□□□□ -1.49
HTTP42858 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HTTP42858 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
HTTP42858 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HTTP42858 AC097173.1-201ENST00000505862 819 ntBASIC5.72□□□□□ -1.49
HTTP42858 RN7SKP276-201ENST00000516242 268 ntBASIC5.72□□□□□ -1.49
HTTP42858 AP003080.1-202ENST00000526526 915 ntBASIC5.72□□□□□ -1.49
HTTP42858 AC106785.1-201ENST00000565935 262 ntBASIC5.72□□□□□ -1.49
HTTP42858 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
HTTP42858 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HTTP42858 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HTTP42858 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.72□□□□□ -1.49
HTTP42858 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HTTP42858 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
HTTP42858 RN7SKP106-201ENST00000410832 272 ntBASIC5.72□□□□□ -1.49
HTTP42858 IGBP1P3-201ENST00000447449 1000 ntBASIC5.72□□□□□ -1.49
HTTP42858 AC010733.1-201ENST00000451515 401 ntBASIC5.72□□□□□ -1.49
HTTP42858 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.72□□□□□ -1.49
HTTP42858 AC006427.1-201ENST00000514359 712 ntBASIC5.72□□□□□ -1.49
HTTP42858 AC006130.2-201ENST00000586202 326 ntBASIC5.72□□□□□ -1.49
HTTP42858 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.72□□□□□ -1.49
HTTP42858 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HTTP42858 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HTTP42858 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HTTP42858 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HTTP42858 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HTTP42858 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.71□□□□□ -1.49
HTTP42858 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
HTTP42858 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HTTP42858 RNA5SP428-201ENST00000365129 132 ntBASIC5.71□□□□□ -1.5
HTTP42858 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.71□□□□□ -1.5
HTTP42858 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.71□□□□□ -1.5
HTTP42858 AC073410.1-201ENST00000435125 589 ntBASIC5.71□□□□□ -1.5
HTTP42858 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.71□□□□□ -1.5
HTTP42858 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.71□□□□□ -1.5
HTTP42858 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.71□□□□□ -1.5
HTTP42858 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.71□□□□□ -1.5
HTTP42858 AL121890.3-201ENST00000618494 516 ntBASIC5.71□□□□□ -1.5
HTTP42858 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HTTP42858 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HTTP42858 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HTTP42858 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC5.71□□□□□ -1.5
HTTP42858 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC5.71□□□□□ -1.5
HTTP42858 SNORD8-201ENST00000363915 110 ntBASIC5.71□□□□□ -1.5
HTTP42858 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HTTP42858 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC5.71□□□□□ -1.5
HTTP42858 OR7E125P-201ENST00000443450 846 ntBASIC5.71□□□□□ -1.5
HTTP42858 SAP18P1-201ENST00000512058 390 ntBASIC5.71□□□□□ -1.5
HTTP42858 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.71□□□□□ -1.5
HTTP42858 KPNA2P3-201ENST00000584190 848 ntBASIC5.71□□□□□ -1.5
HTTP42858 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HTTP42858 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HTTP42858 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HTTP42858 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HTTP42858 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
HTTP42858 AF186996.5-201ENST00000418098 904 ntBASIC5.7□□□□□ -1.5
HTTP42858 RNGTTP1-201ENST00000420965 728 ntBASIC5.7□□□□□ -1.5
HTTP42858 AC011742.2-201ENST00000443818 352 ntBASIC5.7□□□□□ -1.5
HTTP42858 TXNP2-201ENST00000443918 295 ntBASIC5.7□□□□□ -1.5
HTTP42858 AC011276.1-201ENST00000469688 323 ntBASIC5.7□□□□□ -1.5
HTTP42858 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.7□□□□□ -1.5
HTTP42858 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms