Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL109941.1-201ENST00000401925 229 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 DUTP5-201ENST00000406790 469 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC8.6□□□□□ -1.03
CLIP1P30622 AC058823.1-201ENST00000485315 474 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC8.6□□□□□ -1.03
CLIP1P30622 CDH12P4-201ENST00000517835 295 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 CDH12P3-201ENST00000517935 295 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 CDH12P1-201ENST00000518435 295 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC8.6□□□□□ -1.03
CLIP1P30622 MAL2-208ENST00000523307 556 ntTSL 4 BASIC8.6□□□□□ -1.03
CLIP1P30622 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.6□□□□□ -1.03
CLIP1P30622 OR4A17P-201ENST00000526032 904 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 OR4A43P-201ENST00000532938 908 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 OR8G3P-201ENST00000533406 921 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.6□□□□□ -1.03
CLIP1P30622 AC005341.1-201ENST00000571086 708 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 AC060766.1-201ENST00000590824 627 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.6□□□□□ -1.03
CLIP1P30622 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.6□□□□□ -1.03
CLIP1P30622 MTCO1P1-201ENST00000624263 1081 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 ZNF733P-202ENST00000444809 1573 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CLIP1P30622 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CLIP1P30622 AC023421.1-201ENST00000590535 1785 ntBASIC8.59□□□□□ -1.03
CLIP1P30622 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CLIP1P30622 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CLIP1P30622 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
CLIP1P30622 PPIAP9-201ENST00000403866 498 ntBASIC8.59□□□□□ -1.03
CLIP1P30622 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC8.59□□□□□ -1.03
CLIP1P30622 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
CLIP1P30622 AC092754.1-201ENST00000472975 479 ntBASIC8.59□□□□□ -1.03
CLIP1P30622 AC084824.2-201ENST00000548906 345 ntBASIC8.59□□□□□ -1.03
CLIP1P30622 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC8.59□□□□□ -1.03
CLIP1P30622 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.59□□□□□ -1.03
CLIP1P30622 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC8.59□□□□□ -1.03
CLIP1P30622 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CLIP1P30622 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CLIP1P30622 AC079097.1-201ENST00000512187 1399 ntBASIC8.59□□□□□ -1.03
CLIP1P30622 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC8.59□□□□□ -1.03
CLIP1P30622 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC8.59□□□□□ -1.03
CLIP1P30622 AC011493.1-201ENST00000596753 1632 ntBASIC8.59□□□□□ -1.03
CLIP1P30622 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CLIP1P30622 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC8.58□□□□□ -1.04
CLIP1P30622 AC103591.2-201ENST00000265259 766 ntBASIC8.58□□□□□ -1.04
CLIP1P30622 RN7SKP185-201ENST00000362813 326 ntBASIC8.58□□□□□ -1.04
CLIP1P30622 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC8.58□□□□□ -1.04
CLIP1P30622 AC091685.2-201ENST00000454924 864 ntBASIC8.58□□□□□ -1.04
CLIP1P30622 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC8.58□□□□□ -1.04
CLIP1P30622 YWHABP2-201ENST00000540201 713 ntBASIC8.58□□□□□ -1.04
CLIP1P30622 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC8.58□□□□□ -1.04
CLIP1P30622 WWOX-217ENST00000620008 450 ntTSL 2 BASIC8.58□□□□□ -1.04
CLIP1P30622 AC073869.8-201ENST00000641806 335 ntBASIC8.58□□□□□ -1.04
CLIP1P30622 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
CLIP1P30622 NLN-202ENST00000502464 8354 ntTSL 5 BASIC8.58□□□□□ -1.04
CLIP1P30622 AL355488.2-201ENST00000609909 2850 ntBASIC8.58□□□□□ -1.04
CLIP1P30622 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CLIP1P30622 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CLIP1P30622 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC8.58□□□□□ -1.04
CLIP1P30622 TANK-205ENST00000405852 2155 ntTSL 5 BASIC8.58□□□□□ -1.04
CLIP1P30622 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
CLIP1P30622 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CLIP1P30622 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CLIP1P30622 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CLIP1P30622 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC8.57□□□□□ -1.04
CLIP1P30622 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.57□□□□□ -1.04
CLIP1P30622 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CLIP1P30622 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CLIP1P30622 MR1-209ENST00000617803 7584 ntTSL 5 BASIC8.57□□□□□ -1.04
CLIP1P30622 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CLIP1P30622 U3.28-201ENST00000391249 210 ntBASIC8.57□□□□□ -1.04
CLIP1P30622 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CLIP1P30622 PSMD10P3-201ENST00000437000 448 ntBASIC8.57□□□□□ -1.04
CLIP1P30622 AC073465.2-201ENST00000440938 498 ntBASIC8.57□□□□□ -1.04
CLIP1P30622 CEACAMP7-201ENST00000444105 496 ntBASIC8.57□□□□□ -1.04
CLIP1P30622 AC073850.1-201ENST00000449243 255 ntBASIC8.57□□□□□ -1.04
CLIP1P30622 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.57□□□□□ -1.04
CLIP1P30622 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC8.57□□□□□ -1.04
CLIP1P30622 SCARNA20.4-201ENST00000516969 131 ntBASIC8.57□□□□□ -1.04
CLIP1P30622 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC8.57□□□□□ -1.04
CLIP1P30622 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CLIP1P30622 AC009163.6-201ENST00000612367 342 ntBASIC8.57□□□□□ -1.04
CLIP1P30622 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC8.57□□□□□ -1.04
CLIP1P30622 AC073342.3-201ENST00000624211 193 ntBASIC8.57□□□□□ -1.04
CLIP1P30622 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC8.57□□□□□ -1.04
CLIP1P30622 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
CLIP1P30622 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CLIP1P30622 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.57□□□□□ -1.04
CLIP1P30622 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
CLIP1P30622 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.56□□□□□ -1.04
CLIP1P30622 AC112255.1-201ENST00000624070 2493 ntBASIC8.56□□□□□ -1.04
CLIP1P30622 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CLIP1P30622 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CLIP1P30622 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CLIP1P30622 NIPA2P1-201ENST00000426223 976 ntBASIC8.56□□□□□ -1.04
CLIP1P30622 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC8.56□□□□□ -1.04
CLIP1P30622 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC8.56□□□□□ -1.04
CLIP1P30622 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC8.56□□□□□ -1.04
CLIP1P30622 ARL6IP1P3-201ENST00000524544 560 ntBASIC8.56□□□□□ -1.04
CLIP1P30622 AP001784.1-201ENST00000624107 428 ntBASIC8.56□□□□□ -1.04
CLIP1P30622 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms