Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
POLR2AP24928 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
POLR2AP24928 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
POLR2AP24928 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
POLR2AP24928 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
POLR2AP24928 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
POLR2AP24928 AC119674.1-213ENST00000641177 1386 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
POLR2AP24928 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
POLR2AP24928 RPSAP35-201ENST00000413753 818 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.55□□□□□ -1.36
POLR2AP24928 AC016712.1-201ENST00000431088 378 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 AC008072.1-201ENST00000434254 824 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.55□□□□□ -1.36
POLR2AP24928 GAPDHP25-201ENST00000447061 1001 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 AC009963.4-201ENST00000448535 339 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.55□□□□□ -1.36
POLR2AP24928 RPL7P16-201ENST00000479738 738 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.55□□□□□ -1.36
POLR2AP24928 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.55□□□□□ -1.36
POLR2AP24928 MIR2117-201ENST00000516780 80 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.55□□□□□ -1.36
POLR2AP24928 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.55□□□□□ -1.36
POLR2AP24928 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.55□□□□□ -1.36
POLR2AP24928 MIR3934-201ENST00000579806 107 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 Z99129.2-201ENST00000619967 314 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 AC112243.1-201ENST00000623949 3851 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
POLR2AP24928 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
POLR2AP24928 HYDIN2-203ENST00000614586 13885 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
POLR2AP24928 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
POLR2AP24928 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.55□□□□□ -1.36
POLR2AP24928 AL033543.1-201ENST00000623440 13454 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
POLR2AP24928 CASC19-281ENST00000642118 1554 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
POLR2AP24928 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
POLR2AP24928 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
POLR2AP24928 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
POLR2AP24928 RNA5SP326-201ENST00000363209 110 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
POLR2AP24928 MIR620-201ENST00000385232 95 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.55□□□□□ -1.36
POLR2AP24928 RPL7L1P3-201ENST00000455249 689 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.55□□□□□ -1.36
POLR2AP24928 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.55□□□□□ -1.36
POLR2AP24928 AC027338.1-201ENST00000514840 825 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 RNA5SP373-201ENST00000517271 95 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.55□□□□□ -1.36
POLR2AP24928 AC087888.1-201ENST00000550884 1254 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 LINC00557-201ENST00000563184 1279 ntBASIC6.55□□□□□ -1.36
POLR2AP24928 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.55□□□□□ -1.36
POLR2AP24928 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.55□□□□□ -1.36
POLR2AP24928 AP004607.3-201ENST00000530354 3915 ntBASIC6.54□□□□□ -1.36
POLR2AP24928 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
POLR2AP24928 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.54□□□□□ -1.36
POLR2AP24928 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 CASC19-205ENST00000641013 1411 ntBASIC6.54□□□□□ -1.36
POLR2AP24928 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
POLR2AP24928 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.54□□□□□ -1.36
POLR2AP24928 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 AC079777.1-201ENST00000623836 1953 ntBASIC6.54□□□□□ -1.36
POLR2AP24928 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 AL592494.2-201ENST00000425455 1548 ntBASIC6.54□□□□□ -1.36
POLR2AP24928 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.54□□□□□ -1.36
POLR2AP24928 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.54□□□□□ -1.36
POLR2AP24928 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.54□□□□□ -1.36
POLR2AP24928 AC011504.1-201ENST00000623331 4103 ntBASIC6.54□□□□□ -1.36
POLR2AP24928 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.54□□□□□ -1.36
POLR2AP24928 RN7SKP95-201ENST00000362860 303 ntBASIC6.54□□□□□ -1.36
POLR2AP24928 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.54□□□□□ -1.36
POLR2AP24928 RPL7P56-201ENST00000429441 717 ntBASIC6.54□□□□□ -1.36
POLR2AP24928 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.54□□□□□ -1.36
POLR2AP24928 STRADBP1-201ENST00000478954 1281 ntBASIC6.54□□□□□ -1.36
POLR2AP24928 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC6.54□□□□□ -1.36
POLR2AP24928 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.54□□□□□ -1.36
POLR2AP24928 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.54□□□□□ -1.36
POLR2AP24928 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.54□□□□□ -1.36
POLR2AP24928 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
POLR2AP24928 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
POLR2AP24928 AL512506.1-201ENST00000613918 449 ntBASIC6.54□□□□□ -1.36
POLR2AP24928 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
POLR2AP24928 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
POLR2AP24928 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.54□□□□□ -1.36
POLR2AP24928 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.54□□□□□ -1.36
POLR2AP24928 PANDAR-201ENST00000629595 1506 ntBASIC6.54□□□□□ -1.36
POLR2AP24928 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.54□□□□□ -1.36
POLR2AP24928 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms