Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.28□□□□□ -1.4
BDNFP23560 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.28□□□□□ -1.4
BDNFP23560 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.28□□□□□ -1.4
BDNFP23560 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.28□□□□□ -1.4
BDNFP23560 AC073111.2-201ENST00000605657 1075 ntBASIC6.28□□□□□ -1.4
BDNFP23560 AL031601.1-201ENST00000605702 394 ntBASIC6.28□□□□□ -1.4
BDNFP23560 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.28□□□□□ -1.4
BDNFP23560 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.28□□□□□ -1.4
BDNFP23560 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
BDNFP23560 AC119674.1-212ENST00000641155 993 ntBASIC6.28□□□□□ -1.4
BDNFP23560 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
BDNFP23560 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BDNFP23560 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BDNFP23560 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.28□□□□□ -1.4
BDNFP23560 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
BDNFP23560 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.27□□□□□ -1.4
BDNFP23560 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
BDNFP23560 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
BDNFP23560 ZNF733P-202ENST00000444809 1573 ntBASIC6.27□□□□□ -1.41
BDNFP23560 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BDNFP23560 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BDNFP23560 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BDNFP23560 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
BDNFP23560 OR51C1P-202ENST00000641159 1444 ntBASIC6.27□□□□□ -1.41
BDNFP23560 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.27□□□□□ -1.41
BDNFP23560 WDR95P-201ENST00000425638 1542 ntBASIC6.27□□□□□ -1.41
BDNFP23560 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BDNFP23560 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BDNFP23560 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BDNFP23560 RNU6-178P-201ENST00000384631 104 ntBASIC6.27□□□□□ -1.41
BDNFP23560 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.27□□□□□ -1.41
BDNFP23560 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
BDNFP23560 PEX12P1-201ENST00000400284 1048 ntBASIC6.27□□□□□ -1.41
BDNFP23560 AC016739.1-201ENST00000405359 345 ntBASIC6.27□□□□□ -1.41
BDNFP23560 MYL6P5-201ENST00000412707 459 ntBASIC6.27□□□□□ -1.41
BDNFP23560 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.27□□□□□ -1.41
BDNFP23560 AC245060.4-201ENST00000413293 1121 ntBASIC6.27□□□□□ -1.41
BDNFP23560 TRGV6-201ENST00000417928 299 ntBASIC6.27□□□□□ -1.41
BDNFP23560 RPS4XP5-201ENST00000419038 768 ntBASIC6.27□□□□□ -1.41
BDNFP23560 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.27□□□□□ -1.41
BDNFP23560 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.27□□□□□ -1.41
BDNFP23560 AC016027.5-201ENST00000427227 210 ntBASIC6.27□□□□□ -1.41
BDNFP23560 AL731534.1-201ENST00000434711 269 ntBASIC6.27□□□□□ -1.41
BDNFP23560 RPL23AP19-201ENST00000436229 369 ntBASIC6.27□□□□□ -1.41
BDNFP23560 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.27□□□□□ -1.41
BDNFP23560 AL512637.1-201ENST00000439523 1231 ntBASIC6.27□□□□□ -1.41
BDNFP23560 AL162739.1-201ENST00000450606 307 ntBASIC6.27□□□□□ -1.41
BDNFP23560 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.27□□□□□ -1.41
BDNFP23560 AC007998.1-201ENST00000474156 672 ntBASIC6.27□□□□□ -1.41
BDNFP23560 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
BDNFP23560 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.27□□□□□ -1.41
BDNFP23560 AC021087.2-201ENST00000504656 1203 ntBASIC6.27□□□□□ -1.41
BDNFP23560 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.27□□□□□ -1.41
BDNFP23560 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.27□□□□□ -1.41
BDNFP23560 AL671862.1-201ENST00000515851 349 ntBASIC6.27□□□□□ -1.41
BDNFP23560 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.27□□□□□ -1.41
BDNFP23560 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.27□□□□□ -1.41
BDNFP23560 ZNF322P1-201ENST00000568013 1209 ntBASIC6.27□□□□□ -1.41
BDNFP23560 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.27□□□□□ -1.41
BDNFP23560 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
BDNFP23560 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.27□□□□□ -1.41
BDNFP23560 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.27□□□□□ -1.41
BDNFP23560 COX6CP7-201ENST00000597056 208 ntBASIC6.27□□□□□ -1.41
BDNFP23560 FAM27E4-201ENST00000605259 342 ntBASIC6.27□□□□□ -1.41
BDNFP23560 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.27□□□□□ -1.41
BDNFP23560 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.27□□□□□ -1.41
BDNFP23560 AP005431.1-201ENST00000618479 319 ntBASIC6.27□□□□□ -1.41
BDNFP23560 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.27□□□□□ -1.41
BDNFP23560 OR8G3P-202ENST00000641572 1255 ntBASIC6.27□□□□□ -1.41
BDNFP23560 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BDNFP23560 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
BDNFP23560 NEPNP-201ENST00000404786 1371 ntBASIC6.27□□□□□ -1.41
BDNFP23560 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.27□□□□□ -1.41
BDNFP23560 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BDNFP23560 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
BDNFP23560 AL022323.4-201ENST00000623980 13120 ntBASIC6.27□□□□□ -1.41
BDNFP23560 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.27□□□□□ -1.41
BDNFP23560 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
BDNFP23560 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
BDNFP23560 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
BDNFP23560 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
BDNFP23560 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
BDNFP23560 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.26□□□□□ -1.41
BDNFP23560 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
BDNFP23560 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
BDNFP23560 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
BDNFP23560 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
BDNFP23560 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
BDNFP23560 RNA5SP500-201ENST00000364486 119 ntBASIC6.26□□□□□ -1.41
BDNFP23560 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
BDNFP23560 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BDNFP23560 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.26□□□□□ -1.41
BDNFP23560 AC015977.1-201ENST00000418887 292 ntBASIC6.26□□□□□ -1.41
BDNFP23560 AC126120.1-201ENST00000431082 470 ntBASIC6.26□□□□□ -1.41
BDNFP23560 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.26□□□□□ -1.41
BDNFP23560 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.26□□□□□ -1.41
BDNFP23560 CLIC4P1-201ENST00000453177 535 ntBASIC6.26□□□□□ -1.41
BDNFP23560 RN7SL72P-201ENST00000460697 269 ntBASIC6.26□□□□□ -1.41
BDNFP23560 AL355032.1-201ENST00000472981 438 ntBASIC6.26□□□□□ -1.41
BDNFP23560 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms