Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.68□□□□□ -1.5
CDH3P22223 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
CDH3P22223 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH3P22223 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH3P22223 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CDH3P22223 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH3P22223 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CDH3P22223 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH3P22223 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH3P22223 MTCO1P22-201ENST00000604619 1360 ntBASIC5.67□□□□□ -1.5
CDH3P22223 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDH3P22223 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDH3P22223 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH3P22223 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH3P22223 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH3P22223 TTC39DP-201ENST00000416781 1688 ntBASIC5.67□□□□□ -1.5
CDH3P22223 AC003985.2-201ENST00000562268 1669 ntBASIC5.67□□□□□ -1.5
CDH3P22223 CR382285.2-201ENST00000624662 1495 ntBASIC5.67□□□□□ -1.5
CDH3P22223 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH3P22223 TMSB4XP4-201ENST00000323496 618 ntBASIC5.67□□□□□ -1.5
CDH3P22223 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH3P22223 SNORD1C-201ENST00000363315 78 ntBASIC5.67□□□□□ -1.5
CDH3P22223 RN7SKP78-201ENST00000364711 318 ntBASIC5.67□□□□□ -1.5
CDH3P22223 RN7SKP269-201ENST00000365545 319 ntBASIC5.67□□□□□ -1.5
CDH3P22223 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH3P22223 AC002524.1-201ENST00000411687 547 ntBASIC5.67□□□□□ -1.5
CDH3P22223 AL121878.1-201ENST00000418638 859 ntBASIC5.67□□□□□ -1.5
CDH3P22223 USP24P1-201ENST00000433802 779 ntBASIC5.67□□□□□ -1.5
CDH3P22223 ARL4AP4-201ENST00000434170 518 ntBASIC5.67□□□□□ -1.5
CDH3P22223 MTND2P40-201ENST00000436718 841 ntBASIC5.67□□□□□ -1.5
CDH3P22223 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH3P22223 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH3P22223 AP002371.1-201ENST00000463604 433 ntBASIC5.67□□□□□ -1.5
CDH3P22223 UBFD1P1-201ENST00000473259 814 ntBASIC5.67□□□□□ -1.5
CDH3P22223 PFN1P6-201ENST00000476786 399 ntBASIC5.67□□□□□ -1.5
CDH3P22223 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH3P22223 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH3P22223 AC008945.1-201ENST00000505144 499 ntBASIC5.67□□□□□ -1.5
CDH3P22223 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH3P22223 SNORA70.20-201ENST00000516848 126 ntBASIC5.67□□□□□ -1.5
CDH3P22223 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH3P22223 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH3P22223 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH3P22223 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH3P22223 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH3P22223 AC145423.1-201ENST00000605712 336 ntBASIC5.67□□□□□ -1.5
CDH3P22223 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH3P22223 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH3P22223 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH3P22223 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH3P22223 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH3P22223 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH3P22223 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CDH3P22223 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CDH3P22223 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
CDH3P22223 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH3P22223 AC239868.2-201ENST00000564237 4527 ntBASIC5.66□□□□□ -1.5
CDH3P22223 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CDH3P22223 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
CDH3P22223 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH3P22223 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH3P22223 KARSP1-201ENST00000451871 1752 ntBASIC5.66□□□□□ -1.5
CDH3P22223 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CDH3P22223 AL356968.2-201ENST00000412769 1257 ntBASIC5.66□□□□□ -1.5
CDH3P22223 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.66□□□□□ -1.5
CDH3P22223 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH3P22223 AK4P4-201ENST00000419465 646 ntBASIC5.66□□□□□ -1.5
CDH3P22223 AC104843.2-201ENST00000427666 297 ntBASIC5.66□□□□□ -1.5
CDH3P22223 MTND6P12-201ENST00000428247 522 ntBASIC5.66□□□□□ -1.5
CDH3P22223 DEFA9P-201ENST00000433042 285 ntBASIC5.66□□□□□ -1.5
CDH3P22223 AC099670.2-201ENST00000435130 321 ntBASIC5.66□□□□□ -1.5
CDH3P22223 AC023141.8-201ENST00000442554 208 ntBASIC5.66□□□□□ -1.5
CDH3P22223 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH3P22223 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH3P22223 PPIAP19-201ENST00000486414 492 ntBASIC5.66□□□□□ -1.5
CDH3P22223 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH3P22223 RFPL4AP3-201ENST00000515267 345 ntBASIC5.66□□□□□ -1.5
CDH3P22223 FTH1P11-201ENST00000517577 551 ntBASIC5.66□□□□□ -1.5
CDH3P22223 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH3P22223 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH3P22223 AC112191.2-201ENST00000522428 333 ntBASIC5.66□□□□□ -1.5
CDH3P22223 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH3P22223 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH3P22223 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH3P22223 AL359219.2-201ENST00000555184 348 ntBASIC5.66□□□□□ -1.5
CDH3P22223 AC010547.7-201ENST00000570323 333 ntBASIC5.66□□□□□ -1.5
CDH3P22223 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH3P22223 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH3P22223 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH3P22223 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH3P22223 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.66□□□□□ -1.5
CDH3P22223 AP005431.1-201ENST00000618479 319 ntBASIC5.66□□□□□ -1.5
CDH3P22223 AL391597.1-201ENST00000618707 694 ntBASIC5.66□□□□□ -1.5
CDH3P22223 AL445670.1-201ENST00000618889 801 ntBASIC5.66□□□□□ -1.5
CDH3P22223 AC127024.6-201ENST00000621598 424 ntBASIC5.66□□□□□ -1.5
CDH3P22223 AC097461.1-201ENST00000568928 2821 ntBASIC5.66□□□□□ -1.5
CDH3P22223 AL929601.4-201ENST00000613011 1341 ntBASIC5.66□□□□□ -1.5
CDH3P22223 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms