Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.84□□□□□ -1.47
CAPN3P20807 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.84□□□□□ -1.47
CAPN3P20807 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.84□□□□□ -1.47
CAPN3P20807 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.84□□□□□ -1.47
CAPN3P20807 RN7SL101P-201ENST00000496350 279 ntBASIC5.84□□□□□ -1.47
CAPN3P20807 ST13P12-201ENST00000508958 1094 ntBASIC5.84□□□□□ -1.47
CAPN3P20807 RNU6-1308P-201ENST00000516817 103 ntBASIC5.84□□□□□ -1.47
CAPN3P20807 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.84□□□□□ -1.47
CAPN3P20807 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.84□□□□□ -1.47
CAPN3P20807 AGGF1P7-201ENST00000562369 913 ntBASIC5.84□□□□□ -1.47
CAPN3P20807 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.84□□□□□ -1.47
CAPN3P20807 AL589765.6-201ENST00000601909 549 ntBASIC5.84□□□□□ -1.47
CAPN3P20807 AC124916.2-201ENST00000604416 224 ntBASIC5.84□□□□□ -1.47
CAPN3P20807 AC138907.8-201ENST00000623981 2256 ntBASIC5.84□□□□□ -1.47
CAPN3P20807 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CAPN3P20807 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.84□□□□□ -1.47
CAPN3P20807 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.84□□□□□ -1.47
CAPN3P20807 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CAPN3P20807 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
CAPN3P20807 AC005224.3-201ENST00000584683 2140 ntBASIC5.84□□□□□ -1.47
CAPN3P20807 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CAPN3P20807 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CAPN3P20807 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CAPN3P20807 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CAPN3P20807 AC016583.1-201ENST00000624221 2431 ntBASIC5.84□□□□□ -1.48
CAPN3P20807 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CAPN3P20807 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CAPN3P20807 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
CAPN3P20807 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CAPN3P20807 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.83□□□□□ -1.48
CAPN3P20807 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CAPN3P20807 LINC02019-201ENST00000608605 2060 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 AC007996.1-201ENST00000620414 2821 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CAPN3P20807 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CAPN3P20807 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.83□□□□□ -1.48
CAPN3P20807 BX119321.1-201ENST00000428912 797 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 AL513321.1-201ENST00000441175 761 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 XKRY2-201ENST00000442362 1093 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.83□□□□□ -1.48
CAPN3P20807 AL512593.1-201ENST00000444758 779 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 AC002553.2-201ENST00000453217 340 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.83□□□□□ -1.48
CAPN3P20807 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.83□□□□□ -1.48
CAPN3P20807 RN7SL39P-201ENST00000462264 297 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 RN7SL352P-201ENST00000466002 277 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 RPL12P31-201ENST00000478433 450 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.83□□□□□ -1.48
CAPN3P20807 OR4D12P-201ENST00000509361 911 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 AC095052.1-201ENST00000509955 863 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 snoU109.6-201ENST00000516831 118 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 CYCSP25-201ENST00000525280 316 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.83□□□□□ -1.48
CAPN3P20807 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.83□□□□□ -1.48
CAPN3P20807 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.83□□□□□ -1.48
CAPN3P20807 AP001437.1-201ENST00000608783 456 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 Z95327.3-201ENST00000610385 572 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 MIR6768-201ENST00000610734 72 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 AC022106.1-201ENST00000612834 766 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.83□□□□□ -1.48
CAPN3P20807 AC025016.1-201ENST00000616746 682 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 AL121890.2-201ENST00000617644 465 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 MIR6886-201ENST00000619864 61 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.83□□□□□ -1.48
CAPN3P20807 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.83□□□□□ -1.48
CAPN3P20807 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 MTCO1P11-201ENST00000429111 1528 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CAPN3P20807 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 AL592429.1-201ENST00000403909 1473 ntBASIC5.83□□□□□ -1.48
CAPN3P20807 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CAPN3P20807 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
CAPN3P20807 AC025470.1-201ENST00000510053 2032 ntBASIC5.82□□□□□ -1.48
CAPN3P20807 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.82□□□□□ -1.48
CAPN3P20807 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.82□□□□□ -1.48
CAPN3P20807 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CAPN3P20807 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
CAPN3P20807 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CAPN3P20807 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CAPN3P20807 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
CAPN3P20807 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.82□□□□□ -1.48
CAPN3P20807 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.82□□□□□ -1.48
CAPN3P20807 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CAPN3P20807 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
CAPN3P20807 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CAPN3P20807 RN7SKP222-201ENST00000410651 315 ntBASIC5.82□□□□□ -1.48
CAPN3P20807 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms