Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 AC008957.3-201ENST00000624112 2242 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
ERCC3P19447 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.7□□□□□ -1.18
ERCC3P19447 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 AP000547.3-204ENST00000588548 2523 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 STAG3L4-201ENST00000352103 530 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 RNA5SP485-201ENST00000365053 119 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC7.7□□□□□ -1.18
ERCC3P19447 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
ERCC3P19447 MTND4LP17-201ENST00000414607 293 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.7□□□□□ -1.18
ERCC3P19447 AL360013.1-201ENST00000419031 858 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC7.7□□□□□ -1.18
ERCC3P19447 MTND4P32-201ENST00000437189 1237 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 AC144530.1-201ENST00000452862 555 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.7□□□□□ -1.18
ERCC3P19447 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 RN7SL39P-201ENST00000462264 297 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.7□□□□□ -1.18
ERCC3P19447 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC7.7□□□□□ -1.18
ERCC3P19447 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.7□□□□□ -1.18
ERCC3P19447 OR5H4P-201ENST00000510851 923 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 AC021193.1-201ENST00000511607 420 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC7.7□□□□□ -1.18
ERCC3P19447 AC087373.1-201ENST00000524920 491 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 AC084121.1-201ENST00000533882 835 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.7□□□□□ -1.18
ERCC3P19447 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.7□□□□□ -1.18
ERCC3P19447 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.7□□□□□ -1.18
ERCC3P19447 AC026826.3-201ENST00000561747 158 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.7□□□□□ -1.18
ERCC3P19447 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.7□□□□□ -1.18
ERCC3P19447 AL358072.1-201ENST00000604156 575 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 CYCSP1-201ENST00000604815 315 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 MIR6861-201ENST00000618657 64 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.7□□□□□ -1.18
ERCC3P19447 AL122023.1-201ENST00000622847 530 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.7□□□□□ -1.18
ERCC3P19447 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC7.7□□□□□ -1.18
ERCC3P19447 AL355480.1-201ENST00000629041 99 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 U6.107-201ENST00000637108 79 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 AL596275.2-203ENST00000641951 371 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 AL136531.3-201ENST00000624378 3658 ntBASIC7.7□□□□□ -1.18
ERCC3P19447 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
ERCC3P19447 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.69□□□□□ -1.18
ERCC3P19447 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
ERCC3P19447 AC107021.2-201ENST00000567714 2095 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.69□□□□□ -1.18
ERCC3P19447 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 RNU6-83P-201ENST00000384568 112 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 AC104297.1-201ENST00000393779 870 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 OR7E156P-201ENST00000400303 464 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.69□□□□□ -1.18
ERCC3P19447 RNA5SP431-201ENST00000410312 120 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.69□□□□□ -1.18
ERCC3P19447 BX119904.4-201ENST00000424402 301 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 VN1R20P-201ENST00000425215 966 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC7.69□□□□□ -1.18
ERCC3P19447 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC7.69□□□□□ -1.18
ERCC3P19447 AC245047.1-201ENST00000433276 873 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC7.69□□□□□ -1.18
ERCC3P19447 GAPDHP59-201ENST00000435908 267 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 GAPDHP33-201ENST00000443168 1013 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.69□□□□□ -1.18
ERCC3P19447 HMGB1P48-201ENST00000446155 598 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC7.69□□□□□ -1.18
ERCC3P19447 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC7.69□□□□□ -1.18
ERCC3P19447 MRPL35P4-201ENST00000453682 566 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC7.69□□□□□ -1.18
ERCC3P19447 AC107015.1-201ENST00000466902 747 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC7.69□□□□□ -1.18
ERCC3P19447 RPS14P8-201ENST00000478778 369 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC7.69□□□□□ -1.18
ERCC3P19447 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.69□□□□□ -1.18
ERCC3P19447 SNORA74.1-201ENST00000516320 180 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms