Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RNA5SP46-201ENST00000362370 120 ntBASIC4.83□□□□□ -1.64
CTLA4P16410 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 SNORA5.1-201ENST00000384275 131 ntBASIC4.83□□□□□ -1.64
CTLA4P16410 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.83□□□□□ -1.64
CTLA4P16410 OR2AT2P-201ENST00000413438 905 ntBASIC4.83□□□□□ -1.64
CTLA4P16410 AL596448.1-201ENST00000415024 392 ntBASIC4.83□□□□□ -1.64
CTLA4P16410 AC079809.1-201ENST00000415468 276 ntBASIC4.83□□□□□ -1.64
CTLA4P16410 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.83□□□□□ -1.64
CTLA4P16410 AKR1B10P1-201ENST00000425765 942 ntBASIC4.83□□□□□ -1.64
CTLA4P16410 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.83□□□□□ -1.64
CTLA4P16410 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 AC019185.1-201ENST00000442718 389 ntBASIC4.83□□□□□ -1.64
CTLA4P16410 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.83□□□□□ -1.64
CTLA4P16410 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTLA4P16410 AC138866.2-201ENST00000508650 584 ntBASIC4.83□□□□□ -1.64
CTLA4P16410 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.83□□□□□ -1.64
CTLA4P16410 AC130364.2-201ENST00000528639 604 ntBASIC4.83□□□□□ -1.64
CTLA4P16410 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTLA4P16410 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.83□□□□□ -1.64
CTLA4P16410 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.83□□□□□ -1.64
CTLA4P16410 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.83□□□□□ -1.64
CTLA4P16410 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.83□□□□□ -1.64
CTLA4P16410 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CTLA4P16410 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CTLA4P16410 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CTLA4P16410 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.82□□□□□ -1.64
CTLA4P16410 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CTLA4P16410 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.82□□□□□ -1.64
CTLA4P16410 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.82□□□□□ -1.64
CTLA4P16410 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.82□□□□□ -1.64
CTLA4P16410 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 RN7SKP28-201ENST00000364770 305 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 RN7SKP69-201ENST00000365390 305 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 SNORA16A-201ENST00000384342 137 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 MIR621-201ENST00000384919 96 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 DBIP1-201ENST00000401435 260 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CTLA4P16410 BMS1P17-202ENST00000416720 316 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 IPPKP1-201ENST00000422501 768 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.82□□□□□ -1.64
CTLA4P16410 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.82□□□□□ -1.64
CTLA4P16410 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.82□□□□□ -1.64
CTLA4P16410 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.82□□□□□ -1.64
CTLA4P16410 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.82□□□□□ -1.64
CTLA4P16410 PSMA2P2-201ENST00000504319 686 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.82□□□□□ -1.64
CTLA4P16410 MTND6P2-201ENST00000512226 524 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 SNORD46.2-201ENST00000516021 102 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.82□□□□□ -1.64
CTLA4P16410 CDC42P3-201ENST00000518493 633 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 NRBF2P4-201ENST00000520874 850 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.82□□□□□ -1.64
CTLA4P16410 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.82□□□□□ -1.64
CTLA4P16410 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.82□□□□□ -1.64
CTLA4P16410 AL049872.1-201ENST00000556323 322 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.82□□□□□ -1.64
CTLA4P16410 HMGN2P47-201ENST00000559378 272 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.82□□□□□ -1.64
CTLA4P16410 AC027216.1-201ENST00000577726 685 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 RN7SL290P-201ENST00000578661 300 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CTLA4P16410 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CTLA4P16410 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.82□□□□□ -1.64
CTLA4P16410 AC244107.2-201ENST00000611773 76 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 CU639417.4-201ENST00000623928 207 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 MIR1910-201ENST00000636955 80 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.82□□□□□ -1.64
CTLA4P16410 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 AL078621.3-201ENST00000623707 2042 ntBASIC4.82□□□□□ -1.64
CTLA4P16410 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTLA4P16410 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CTLA4P16410 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.81□□□□□ -1.64
CTLA4P16410 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTLA4P16410 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms